RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PPP1R12CQ9BZL4 782 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 SERPINA10Q9UK55 444 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
CHD8-212ENST00000557329 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
CHD8-212ENST00000557329 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
CHD8-212ENST00000557329 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
CHD8-212ENST00000557329 ARHGEF10LQ9HCE6 1279 aa7.46□□□□□ -1.22
CHD8-212ENST00000557329 ZNF777Q9ULD5 760 aaPredicted RBP7.46□□□□□ -1.22
CHD8-212ENST00000557329 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 INHAP05111 366 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 SLURP2P0DP57 97 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 CTSOP43234 321 aaPredicted RBP7.45□□□□□ -1.22
CHD8-212ENST00000557329 GTF2IP78347 998 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 PSME1Q06323 249 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 GNASQ5JWF2 1037 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 TBC1D9Q6ZT07 1266 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 CCDC155Q8N6L0 562 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 CCDC97Q96F63 343 aaPredicted RBP7.45□□□□□ -1.22
CHD8-212ENST00000557329 UCN2Q96RP3 112 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 GRIP2Q9C0E4 1043 aa7.45□□□□□ -1.22
CHD8-212ENST00000557329 TFIP11Q9UBB9 837 aaKnown RBP7.45□□□□□ -1.22
CHD8-212ENST00000557329 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
CHD8-212ENST00000557329 SLC35F4A4IF30 521 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 M0R2N6 131 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 IGHA1P01876 353 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 GDF10P55107 478 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 CENPCQ03188 943 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
CHD8-212ENST00000557329 ZSCAN10Q96SZ4 725 aaPredicted RBP7.44□□□□□ -1.22
CHD8-212ENST00000557329 VRTNQ9H8Y1 702 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 MKRN1Q9UHC7 482 aaKnown RBP7.44□□□□□ -1.22
CHD8-212ENST00000557329 PCDHGA11Q9Y5H2 935 aa7.44□□□□□ -1.22
CHD8-212ENST00000557329 DNMT3AQ9Y6K1 912 aaPredicted RBP7.44□□□□□ -1.22
CHD8-212ENST00000557329 ARHGEF15O94989 841 aa7.43□□□□□ -1.22
CHD8-212ENST00000557329 RNFT1Q5M7Z0 435 aa7.43□□□□□ -1.22
CHD8-212ENST00000557329 FOXD4L5Q5VV16 416 aaPredicted RBP7.43□□□□□ -1.22
CHD8-212ENST00000557329 TAS1R3Q7RTX0 852 aa7.43□□□□□ -1.22
CHD8-212ENST00000557329 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
CHD8-212ENST00000557329 SLC4A9Q96Q91 983 aa7.43□□□□□ -1.22
CHD8-212ENST00000557329 DNAAF2Q9NVR5 837 aaKnown RBP7.43□□□□□ -1.22
CHD8-212ENST00000557329 FIGNL2A6NMB9 653 aa7.42□□□□□ -1.22
CHD8-212ENST00000557329 TMEM214Q6NUQ4 689 aaKnown RBP7.42□□□□□ -1.22
CHD8-212ENST00000557329 KANK3Q6NY19 840 aa7.42□□□□□ -1.22
CHD8-212ENST00000557329 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
CHD8-212ENST00000557329 HRH3Q9Y5N1 445 aa7.42□□□□□ -1.22
CHD8-212ENST00000557329 BICRAQ9NZM4 1560 aa7.42□□□□□ -1.22
CHD8-212ENST00000557329 FAM196BA6NMK8 535 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 H7C1W4 665 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 IL2RAP01589 272 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 SMTNP53814 917 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 FOXK2Q01167 660 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 TLR1Q15399 786 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
CHD8-212ENST00000557329 SIX5Q8N196 739 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 RHBDD1Q8TEB9 315 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 DYRK1BQ9Y463 629 aa7.41□□□□□ -1.22
CHD8-212ENST00000557329 CDK2AP1O14519 115 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 ITGA6P23229 1130 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.22
CHD8-212ENST00000557329 SCNN1DP51172 638 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 MTFR1Q15390 333 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 DEPDC4Q8N2C3 294 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 VWA5B2Q8N398 1253 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
CHD8-212ENST00000557329 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 A6NJY4 79 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 RASA1P20936 1047 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 IRS1P35568 1242 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
CHD8-212ENST00000557329 CCDC102BQ68D86 513 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 NBPF10Q6P3W6 841 aaKnown RBP7.39□□□□□ -1.23
CHD8-212ENST00000557329 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 PRICKLE2Q7Z3G6 844 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 GAS2L2Q8NHY3 880 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 WHAMMQ8TF30 809 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
CHD8-212ENST00000557329 FHDC1Q9C0D6 1143 aaPredicted RBP7.39□□□□□ -1.23
CHD8-212ENST00000557329 RAB6BQ9NRW1 208 aa7.39□□□□□ -1.23
CHD8-212ENST00000557329 SEC13P55735 322 aa7.38□□□□□ -1.23
CHD8-212ENST00000557329 MARSP56192 900 aaKnown RBP7.38□□□□□ -1.23
CHD8-212ENST00000557329 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
CHD8-212ENST00000557329 TIMMDC1Q9NPL8 285 aa7.38□□□□□ -1.23
CHD8-212ENST00000557329 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
CHD8-212ENST00000557329 NBPF1Q3BBV0 1214 aa7.37□□□□□ -1.23
CHD8-212ENST00000557329 GPAT2Q6NUI2 795 aa7.37□□□□□ -1.23
CHD8-212ENST00000557329 TPCN2Q8NHX9 752 aa7.37□□□□□ -1.23
CHD8-212ENST00000557329 CDC14CA4D256 554 aa7.36□□□□□ -1.23
CHD8-212ENST00000557329 ZBTB7BO15156 539 aaPredicted RBP7.36□□□□□ -1.23
CHD8-212ENST00000557329 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
CHD8-212ENST00000557329 F11P03951 625 aa7.36□□□□□ -1.23
CHD8-212ENST00000557329 RFX1P22670 979 aa7.36□□□□□ -1.23
CHD8-212ENST00000557329 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
CHD8-212ENST00000557329 KANK4Q5T7N3 995 aaPredicted RBP7.36□□□□□ -1.23
CHD8-212ENST00000557329 ZNF358Q9NW07 568 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms