RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
AL390334.1-204ENST00000556890 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
AL390334.1-204ENST00000556890 RRBP1Q9P2E9 1410 aaKnown RBP10.04□□□□□ -0.8
AL390334.1-204ENST00000556890 WNT7AO00755 349 aa10.03□□□□□ -0.8
AL390334.1-204ENST00000556890 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
AL390334.1-204ENST00000556890 FAM135BQ49AJ0 1406 aa10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 DXOO77932 396 aaKnown RBP10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 C14orf37Q86TY3 774 aa10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 SETD1AO15047 1707 aaKnown RBP10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.81
AL390334.1-204ENST00000556890 PPLO60437 1756 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 TTC24A2A3L6 582 aaPredicted RBP10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 AXIN1O15169 862 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 CLCN1P35523 988 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 TRIM32Q13049 653 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 ZNF326Q5BKZ1 582 aaKnown RBP10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
AL390334.1-204ENST00000556890 NAIPQ13075 1403 aa10□□□□□ -0.81
AL390334.1-204ENST00000556890 ADAMTS13Q76LX8 1427 aa10□□□□□ -0.81
AL390334.1-204ENST00000556890 HOXA2O43364 376 aa10□□□□□ -0.81
AL390334.1-204ENST00000556890 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
AL390334.1-204ENST00000556890 TBX22Q9Y458 520 aa10□□□□□ -0.81
AL390334.1-204ENST00000556890 PIK3R4Q99570 1358 aa10□□□□□ -0.81
AL390334.1-204ENST00000556890 NEXMIFQ5QGS0 1516 aa9.99□□□□□ -0.81
AL390334.1-204ENST00000556890 NALCNQ8IZF0 1738 aa9.99□□□□□ -0.81
AL390334.1-204ENST00000556890 COL16A1Q07092 1604 aaPredicted RBP9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 SLAIN2Q9P270 581 aa9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 SHPRHQ149N8 1683 aa9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
AL390334.1-204ENST00000556890 HFM1A2PYH4 1435 aa9.97□□□□□ -0.81
AL390334.1-204ENST00000556890 ATF3P18847 181 aa9.96□□□□□ -0.82
AL390334.1-204ENST00000556890 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
AL390334.1-204ENST00000556890 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.82
AL390334.1-204ENST00000556890 NHSL1Q5SYE7 1610 aa9.96□□□□□ -0.82
AL390334.1-204ENST00000556890 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 HLA-CQ95604 372 aa9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 MRGPRX2Q96LB1 330 aa9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 PTPRUQ92729 1446 aa9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 AHDC1Q5TGY3 1603 aaPredicted RBP9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 IFT172Q9UG01 1749 aa9.95□□□□□ -0.82
AL390334.1-204ENST00000556890 SMPD1P17405 629 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 WNT7BP56706 349 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 C19orf44Q9H6X5 657 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 DACH1Q9UI36 760 aa9.94□□□□□ -0.82
AL390334.1-204ENST00000556890 JCADQ9P266 1359 aa9.93□□□□□ -0.82
AL390334.1-204ENST00000556890 JUNDP17535 347 aa9.93□□□□□ -0.82
AL390334.1-204ENST00000556890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
AL390334.1-204ENST00000556890 DCCP43146 1447 aa9.92□□□□□ -0.82
AL390334.1-204ENST00000556890 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
AL390334.1-204ENST00000556890 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
AL390334.1-204ENST00000556890 GMPR2Q9P2T1 348 aaKnown RBP9.92□□□□□ -0.82
AL390334.1-204ENST00000556890 METP08581 1390 aa9.91□□□□□ -0.82
AL390334.1-204ENST00000556890 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
AL390334.1-204ENST00000556890 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
AL390334.1-204ENST00000556890 GUCA2AQ02747 115 aa9.9□□□□□ -0.82
AL390334.1-204ENST00000556890 MEX3CQ5U5Q3 659 aaKnown RBP9.9□□□□□ -0.82
AL390334.1-204ENST00000556890 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.83
AL390334.1-204ENST00000556890 LCE2AQ5TA79 106 aaPredicted RBP9.89□□□□□ -0.83
AL390334.1-204ENST00000556890 RGS17Q9UGC6 210 aaPredicted RBP9.89□□□□□ -0.83
AL390334.1-204ENST00000556890 KNDC1Q76NI1 1749 aa9.89□□□□□ -0.83
AL390334.1-204ENST00000556890 CCDC144AA2RUR9 1427 aa9.89□□□□□ -0.83
AL390334.1-204ENST00000556890 MST1RQ04912 1400 aa9.89□□□□□ -0.83
AL390334.1-204ENST00000556890 SPATA31A6Q5VVP1 1343 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 RPGRIP1LQ68CZ1 1315 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 J3QL48 77 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 FDX1P10109 184 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 SKOR1P84550 965 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 SYMPKQ92797 1274 aaKnown RBP9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 LRP6O75581 1613 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 PTCH1Q13635 1447 aa9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
AL390334.1-204ENST00000556890 SSTR3P32745 418 aaPredicted RBP9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 NUDT12Q9BQG2 462 aa9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 MARF1Q9Y4F3 1742 aaKnown RBP9.87□□□□□ -0.83
AL390334.1-204ENST00000556890 LAMC1P11047 1609 aa9.86□□□□□ -0.83
AL390334.1-204ENST00000556890 POTEAQ6S8J7 498 aa9.86□□□□□ -0.83
AL390334.1-204ENST00000556890 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
AL390334.1-204ENST00000556890 HPS1Q92902 700 aa9.85□□□□□ -0.83
AL390334.1-204ENST00000556890 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 WFS1O76024 890 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 RGL3Q3MIN7 710 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 PCDHGC3Q9UN70 934 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 ROBO2Q9HCK4 1378 aa9.84□□□□□ -0.83
AL390334.1-204ENST00000556890 CDC42BPGQ6DT37 1551 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms