RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZMYM1Q5SVZ6 1142 aa9.08□□□□□ -0.96
SRP54-207ENST00000555535 ATP1B4Q9UN42 357 aaPredicted RBP9.08□□□□□ -0.96
SRP54-207ENST00000555535 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
SRP54-207ENST00000555535 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
SRP54-207ENST00000555535 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
SRP54-207ENST00000555535 SUV39H2Q9H5I1 410 aa9.07□□□□□ -0.96
SRP54-207ENST00000555535 ZBBXA8MT70 800 aa9.06□□□□□ -0.96
SRP54-207ENST00000555535 HOXB4P17483 251 aaPredicted RBP9.06□□□□□ -0.96
SRP54-207ENST00000555535 EFHC2Q5JST6 749 aa9.06□□□□□ -0.96
SRP54-207ENST00000555535 PCDHB9Q9Y5E1 797 aa9.06□□□□□ -0.96
SRP54-207ENST00000555535 USP17L8P0C7I0 530 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 GGA1Q9UJY5 639 aa9.05□□□□□ -0.96
SRP54-207ENST00000555535 GNRH1P01148 92 aa9.04□□□□□ -0.96
SRP54-207ENST00000555535 THBS1P07996 1170 aa9.04□□□□□ -0.96
SRP54-207ENST00000555535 EPXP11678 715 aa9.04□□□□□ -0.96
SRP54-207ENST00000555535 TRAK2O60296 914 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 ARAFP10398 606 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 CHRNA4P43681 627 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 DGKGP49619 791 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
SRP54-207ENST00000555535 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
SRP54-207ENST00000555535 FGFR3P22607 806 aa9.02□□□□□ -0.97
SRP54-207ENST00000555535 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
SRP54-207ENST00000555535 ITGB7P26010 798 aa9.01□□□□□ -0.97
SRP54-207ENST00000555535 GATA4P43694 442 aa9.01□□□□□ -0.97
SRP54-207ENST00000555535 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
SRP54-207ENST00000555535 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
SRP54-207ENST00000555535 CENPCQ03188 943 aa9□□□□□ -0.97
SRP54-207ENST00000555535 DOC2BQ14184 412 aa9□□□□□ -0.97
SRP54-207ENST00000555535 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
SRP54-207ENST00000555535 FIGNL1Q6PIW4 674 aa9□□□□□ -0.97
SRP54-207ENST00000555535 RNF135Q8IUD6 432 aa9□□□□□ -0.97
SRP54-207ENST00000555535 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
SRP54-207ENST00000555535 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
SRP54-207ENST00000555535 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
SRP54-207ENST00000555535 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
SRP54-207ENST00000555535 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
SRP54-207ENST00000555535 PCDHB11Q9Y5F2 797 aa8.99□□□□□ -0.97
SRP54-207ENST00000555535 C2CD2LO14523 706 aa8.98□□□□□ -0.97
SRP54-207ENST00000555535 SCTRP47872 440 aa8.98□□□□□ -0.97
SRP54-207ENST00000555535 ABHD17AQ96GS6 310 aa8.98□□□□□ -0.97
SRP54-207ENST00000555535 NDFIP2Q9NV92 336 aa8.98□□□□□ -0.97
SRP54-207ENST00000555535 SPATA31C1P0DKV0 1188 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 MSX1P28360 303 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 PHKA2P46019 1235 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
SRP54-207ENST00000555535 RUBCNLQ9H714 662 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
SRP54-207ENST00000555535 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
SRP54-207ENST00000555535 SPDYE3A6NKU9 549 aa8.96□□□□□ -0.98
SRP54-207ENST00000555535 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
SRP54-207ENST00000555535 CHSY3Q70JA7 882 aa8.96□□□□□ -0.98
SRP54-207ENST00000555535 CRISPLD1Q9H336 500 aa8.96□□□□□ -0.98
SRP54-207ENST00000555535 NEURL1BA8MQ27 555 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 BNIP3LO60238 219 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 MYCP01106 439 aaPredicted RBP8.95□□□□□ -0.98
SRP54-207ENST00000555535 IL2RAP01589 272 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 ADH6P28332 368 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 CTBSQ01459 385 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 ESCO1Q5FWF5 840 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 TRIM34Q9BYJ4 488 aa8.95□□□□□ -0.98
SRP54-207ENST00000555535 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
SRP54-207ENST00000555535 ZFP64Q9NPA5 681 aa8.94□□□□□ -0.98
SRP54-207ENST00000555535 RAB6BQ9NRW1 208 aa8.94□□□□□ -0.98
SRP54-207ENST00000555535 HRH3Q9Y5N1 445 aa8.94□□□□□ -0.98
SRP54-207ENST00000555535 TMEM259Q4ZIN3 620 aa8.93□□□□□ -0.98
SRP54-207ENST00000555535 C4orf17Q53FE4 359 aa8.93□□□□□ -0.98
SRP54-207ENST00000555535 ARTNQ5T4W7 220 aa8.93□□□□□ -0.98
SRP54-207ENST00000555535 C1orf216Q8TAB5 229 aa8.93□□□□□ -0.98
SRP54-207ENST00000555535 PCDHGC4Q9Y5F7 938 aa8.93□□□□□ -0.98
SRP54-207ENST00000555535 RFC5P40937 340 aa8.92□□□□□ -0.98
SRP54-207ENST00000555535 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
SRP54-207ENST00000555535 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
SRP54-207ENST00000555535 RHBDD1Q8TEB9 315 aa8.92□□□□□ -0.98
SRP54-207ENST00000555535 KRTAP4-12Q9BQ66 201 aa8.92□□□□□ -0.98
SRP54-207ENST00000555535 FHDC1Q9C0D6 1143 aaPredicted RBP8.92□□□□□ -0.98
SRP54-207ENST00000555535 BTBD11A6QL63 1104 aa8.91□□□□□ -0.98
SRP54-207ENST00000555535 NR1H3Q13133 447 aa8.91□□□□□ -0.98
SRP54-207ENST00000555535 RSPO4Q2I0M5 234 aaPredicted RBP8.91□□□□□ -0.98
SRP54-207ENST00000555535 NBPF11Q86T75 865 aa8.91□□□□□ -0.98
SRP54-207ENST00000555535 PLVAPQ9BX97 442 aa8.9□□□□□ -0.98
SRP54-207ENST00000555535 PRRT3Q5FWE3 981 aa8.89□□□□□ -0.99
SRP54-207ENST00000555535 NKAPLQ5M9Q1 402 aa8.89□□□□□ -0.99
SRP54-207ENST00000555535 TBC1D9Q6ZT07 1266 aa8.89□□□□□ -0.99
SRP54-207ENST00000555535 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
SRP54-207ENST00000555535 APBA3O96018 575 aa8.88□□□□□ -0.99
SRP54-207ENST00000555535 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
SRP54-207ENST00000555535 ZCCHC2Q9C0B9 1178 aaKnown RBP8.87□□□□□ -0.99
SRP54-207ENST00000555535 ATXN7O15265 892 aaPredicted RBP8.86□□□□□ -0.99
SRP54-207ENST00000555535 DYRK3O43781 588 aa8.85□□□□□ -0.99
SRP54-207ENST00000555535 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
SRP54-207ENST00000555535 KDM4CQ9H3R0 1056 aa8.85□□□□□ -0.99
SRP54-207ENST00000555535 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
SRP54-207ENST00000555535 ALAS2P22557 587 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms