RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 DDX19AQ9NUU7 478 aaKnown RBP10.14□□□□□ -0.79
SHE-203ENST00000555188 FYCO1Q9BQS8 1478 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 XBP1P17861 261 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 RPAP2Q8IXW5 612 aaPredicted RBP10.14□□□□□ -0.79
SHE-203ENST00000555188 PAF1Q8N7H5 531 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 TMX1Q9H3N1 280 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 NF2P35240 595 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 ZNF165P49910 485 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 CCDC186Q7Z3E2 898 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 CWC27Q6UX04 472 aaKnown RBP10.14□□□□□ -0.79
SHE-203ENST00000555188 SNX21Q969T3 373 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
SHE-203ENST00000555188 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 ARFGAP3Q9NP61 516 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 DHX29Q7Z478 1369 aaKnown RBP10.13□□□□□ -0.79
SHE-203ENST00000555188 ERBINQ96RT1 1412 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
SHE-203ENST00000555188 TMC6Q7Z403 805 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 CA8P35219 290 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
SHE-203ENST00000555188 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 ENOX2Q16206 610 aaKnown RBP10.13□□□□□ -0.79
SHE-203ENST00000555188 CASKIN1Q8WXD9 1431 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 CTAGE5O15320 804 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 KIAA1328Q86T90 577 aa10.13□□□□□ -0.79
SHE-203ENST00000555188 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
SHE-203ENST00000555188 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
SHE-203ENST00000555188 GABPB1Q06547 395 aaPredicted RBP10.12□□□□□ -0.79
SHE-203ENST00000555188 MYRIPQ8NFW9 859 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 CCDC30Q5VVM6 783 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 TTC16Q8NEE8 873 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 KIAA1107Q9UPP5 1409 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 SKILP12757 684 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 CAPN2P17655 700 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 MICALL1Q8N3F8 863 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
SHE-203ENST00000555188 STX6O43752 255 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 SSH1Q8WYL5 1049 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 STX1AQ16623 288 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 SH2B1Q9NRF2 756 aaPredicted RBP10.11□□□□□ -0.79
SHE-203ENST00000555188 RAI14Q9P0K7 980 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 IGF1RP08069 1367 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
SHE-203ENST00000555188 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 GOLGA6L9A6NEM1 432 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
SHE-203ENST00000555188 TXLNAP40222 546 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 TDO2P48775 406 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 CAVIN2O95810 425 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 MX1P20591 662 aa10.11□□□□□ -0.79
SHE-203ENST00000555188 GBP2P32456 591 aaPredicted RBP10.1□□□□□ -0.79
SHE-203ENST00000555188 GNG11P61952 73 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 CCDC91Q7Z6B0 441 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 SEC24BO95487 1268 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 MCM6Q14566 821 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 CFTRP13569 1480 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 CCDC43Q96MW1 224 aaKnown RBP10.1□□□□□ -0.79
SHE-203ENST00000555188 RBSNQ9H1K0 784 aa10.1□□□□□ -0.79
SHE-203ENST00000555188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHE-203ENST00000555188 POLA1P09884 1462 aaPredicted RBP10.09□□□□□ -0.79
SHE-203ENST00000555188 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 NEFHP12036 1026 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 USP48Q86UV5 1035 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.79
SHE-203ENST00000555188 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 STIM1Q13586 685 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 KRBA2Q6ZNG9 492 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 EXOC6BQ9Y2D4 811 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 KRT32Q14532 448 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 GAS2L2Q8NHY3 880 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 CCDC12Q8WUD4 166 aaPredicted RBP10.09□□□□□ -0.79
SHE-203ENST00000555188 TMX3Q96JJ7 454 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 MAP2K1Q02750 393 aaPredicted RBP10.09□□□□□ -0.79
SHE-203ENST00000555188 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 TRIM27P14373 513 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 WDR78Q5VTH9 848 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 PRPF40BQ6NWY9 871 aaKnown RBP10.09□□□□□ -0.79
SHE-203ENST00000555188 LUZP1Q86V48 1076 aa10.09□□□□□ -0.79
SHE-203ENST00000555188 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
SHE-203ENST00000555188 PTGS1P23219 599 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
SHE-203ENST00000555188 SART3Q15020 963 aaKnown RBP10.08□□□□□ -0.8
SHE-203ENST00000555188 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 ABTB2Q8N961 1025 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 GJB2P29033 226 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 ANO6Q4KMQ2 910 aa10.08□□□□□ -0.8
SHE-203ENST00000555188 AMOTL1Q8IY63 956 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms