RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
GABRB3-208ENST00000555094 PAPPAQ13219 1627 aa13.96□□□□□ -0.18
GABRB3-208ENST00000555094 KIF16BQ96L93 1317 aa13.96□□□□□ -0.18
GABRB3-208ENST00000555094 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.18
GABRB3-208ENST00000555094 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.18
GABRB3-208ENST00000555094 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-208ENST00000555094 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
GABRB3-208ENST00000555094 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-208ENST00000555094 TEFQ10587 303 aa13.95□□□□□ -0.18
GABRB3-208ENST00000555094 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
GABRB3-208ENST00000555094 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-208ENST00000555094 TNNQ9UQP3 1299 aa13.95□□□□□ -0.18
GABRB3-208ENST00000555094 GLI3P10071 1580 aa13.95□□□□□ -0.18
GABRB3-208ENST00000555094 CACNA1FO60840 1977 aa13.95□□□□□ -0.18
GABRB3-208ENST00000555094 MRPL50Q8N5N7 158 aaKnown RBP13.94□□□□□ -0.18
GABRB3-208ENST00000555094 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
GABRB3-208ENST00000555094 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
GABRB3-208ENST00000555094 TNS2Q63HR2 1409 aa13.94□□□□□ -0.18
GABRB3-208ENST00000555094 C5P01031 1676 aa13.94□□□□□ -0.18
GABRB3-208ENST00000555094 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
GABRB3-208ENST00000555094 RLBP1P12271 317 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 HSPA1LP34931 641 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 DCAF5Q96JK2 942 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
GABRB3-208ENST00000555094 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
GABRB3-208ENST00000555094 TRIM27P14373 513 aa13.92□□□□□ -0.18
GABRB3-208ENST00000555094 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
GABRB3-208ENST00000555094 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
GABRB3-208ENST00000555094 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
GABRB3-208ENST00000555094 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-208ENST00000555094 BCL9LQ86UU0 1499 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
GABRB3-208ENST00000555094 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
GABRB3-208ENST00000555094 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
GABRB3-208ENST00000555094 RGS12O14924 1447 aa13.91□□□□□ -0.18
GABRB3-208ENST00000555094 ITGB4P16144 1822 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 KCNQ3O43525 872 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
GABRB3-208ENST00000555094 SPATA31A5Q5VU36 1347 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 SPATA31A7Q8IWB4 1347 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 DOT1LQ8TEK3 1739 aa13.9□□□□□ -0.18
GABRB3-208ENST00000555094 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
GABRB3-208ENST00000555094 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
GABRB3-208ENST00000555094 HOXB7P09629 217 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 MS4A1P11836 297 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 COG6Q9Y2V7 657 aa13.88□□□□□ -0.19
GABRB3-208ENST00000555094 THRAP3Q9Y2W1 955 aaKnown RBP13.88□□□□□ -0.19
GABRB3-208ENST00000555094 ABCC4O15439 1325 aa13.87□□□□□ -0.19
GABRB3-208ENST00000555094 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
GABRB3-208ENST00000555094 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
GABRB3-208ENST00000555094 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
GABRB3-208ENST00000555094 THSD7AQ9UPZ6 1657 aa13.87□□□□□ -0.19
GABRB3-208ENST00000555094 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
GABRB3-208ENST00000555094 MVPQ14764 893 aaKnown RBP13.87□□□□□ -0.19
GABRB3-208ENST00000555094 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-208ENST00000555094 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
GABRB3-208ENST00000555094 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-208ENST00000555094 ERVV-2B6SEH9 535 aa13.86□□□□□ -0.19
GABRB3-208ENST00000555094 NFATC2IPQ8NCF5 419 aa13.86□□□□□ -0.19
GABRB3-208ENST00000555094 CABP4P57796 275 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 VPS72Q15906 364 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 NGLY1Q96IV0 654 aa13.85□□□□□ -0.19
GABRB3-208ENST00000555094 PTPRCP08575 1304 aa13.84□□□□□ -0.19
GABRB3-208ENST00000555094 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
GABRB3-208ENST00000555094 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
GABRB3-208ENST00000555094 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
GABRB3-208ENST00000555094 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
GABRB3-208ENST00000555094 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 AAMPQ13685 434 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 G2E3Q7L622 706 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
GABRB3-208ENST00000555094 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
GABRB3-208ENST00000555094 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
GABRB3-208ENST00000555094 EXOC5O00471 708 aa13.81□□□□□ -0.2
GABRB3-208ENST00000555094 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-208ENST00000555094 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
GABRB3-208ENST00000555094 BCL9O00512 1426 aa13.81□□□□□ -0.2
GABRB3-208ENST00000555094 ATRNO75882 1429 aa13.81□□□□□ -0.2
GABRB3-208ENST00000555094 DDB1Q16531 1140 aa13.8□□□□□ -0.2
GABRB3-208ENST00000555094 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
GABRB3-208ENST00000555094 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
GABRB3-208ENST00000555094 USP21Q9UK80 565 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms