RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 COL8A1P27658 744 aa11.86□□□□□ -0.51
VRK1-203ENST00000555067 MCCD1P59942 119 aaPredicted RBP11.86□□□□□ -0.51
VRK1-203ENST00000555067 UBAP2LQ14157 1087 aaKnown RBP11.86□□□□□ -0.51
VRK1-203ENST00000555067 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
VRK1-203ENST00000555067 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
VRK1-203ENST00000555067 PCDHB11Q9Y5F2 797 aa11.83□□□□□ -0.52
VRK1-203ENST00000555067 HRH3Q9Y5N1 445 aa11.83□□□□□ -0.52
VRK1-203ENST00000555067 SOCS7O14512 581 aa11.82□□□□□ -0.52
VRK1-203ENST00000555067 BANK1Q8NDB2 785 aa11.82□□□□□ -0.52
VRK1-203ENST00000555067 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
VRK1-203ENST00000555067 PHF24Q9UPV7 400 aa11.82□□□□□ -0.52
VRK1-203ENST00000555067 GNRH1P01148 92 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 IL2RAP01589 272 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 NR1H3Q13133 447 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 LBRQ14739 615 aaKnown RBP11.81□□□□□ -0.52
VRK1-203ENST00000555067 EDARADDQ8WWZ3 215 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 KRTAP4-8Q9BYQ9 185 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 RAB6BQ9NRW1 208 aa11.81□□□□□ -0.52
VRK1-203ENST00000555067 A0A1B0GTH6 734 aa11.8□□□□□ -0.52
VRK1-203ENST00000555067 CENPCQ03188 943 aa11.8□□□□□ -0.52
VRK1-203ENST00000555067 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
VRK1-203ENST00000555067 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
VRK1-203ENST00000555067 LINC00114Q6XXX2 140 aa11.79□□□□□ -0.52
VRK1-203ENST00000555067 GOLGA6L1Q8N7Z2 621 aa11.79□□□□□ -0.52
VRK1-203ENST00000555067 GPR37L1O60883 481 aa11.78□□□□□ -0.52
VRK1-203ENST00000555067 Q8N3U1 123 aa11.78□□□□□ -0.52
VRK1-203ENST00000555067 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
VRK1-203ENST00000555067 APBB1O00213 710 aa11.77□□□□□ -0.53
VRK1-203ENST00000555067 FURINP09958 794 aa11.77□□□□□ -0.53
VRK1-203ENST00000555067 C2CD2LO14523 706 aa11.76□□□□□ -0.53
VRK1-203ENST00000555067 PHKA2P46019 1235 aa11.76□□□□□ -0.53
VRK1-203ENST00000555067 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
VRK1-203ENST00000555067 ZSCAN10Q96SZ4 725 aaPredicted RBP11.76□□□□□ -0.53
VRK1-203ENST00000555067 SUV39H2Q9H5I1 410 aa11.76□□□□□ -0.53
VRK1-203ENST00000555067 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
VRK1-203ENST00000555067 ATXN7L1Q9ULK2 861 aaPredicted RBP11.76□□□□□ -0.53
VRK1-203ENST00000555067 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
VRK1-203ENST00000555067 RRAGCQ9HB90 399 aa11.75□□□□□ -0.53
VRK1-203ENST00000555067 C4orf17Q53FE4 359 aa11.74□□□□□ -0.53
VRK1-203ENST00000555067 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
VRK1-203ENST00000555067 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
VRK1-203ENST00000555067 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
VRK1-203ENST00000555067 GRIN2CQ14957 1233 aa11.72□□□□□ -0.53
VRK1-203ENST00000555067 MTMR14Q8NCE2 650 aa11.72□□□□□ -0.53
VRK1-203ENST00000555067 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
VRK1-203ENST00000555067 MSX1P28360 303 aa11.71□□□□□ -0.53
VRK1-203ENST00000555067 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
VRK1-203ENST00000555067 BNIP3LO60238 219 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 BMP4P12644 408 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 FGFR3P22607 806 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 GNASQ5JWF2 1037 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 ABHD17AQ96GS6 310 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
VRK1-203ENST00000555067 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
VRK1-203ENST00000555067 C1QTNF9BB2RNN3 333 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 GNB5O14775 395 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 CTBSQ01459 385 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 PGBD3Q8N328 593 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 BTBD6Q96KE9 485 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 CRISPLD1Q9H336 500 aa11.69□□□□□ -0.54
VRK1-203ENST00000555067 PIK3R2O00459 728 aa11.68□□□□□ -0.54
VRK1-203ENST00000555067 EPXP11678 715 aa11.68□□□□□ -0.54
VRK1-203ENST00000555067 DGKGP49619 791 aa11.68□□□□□ -0.54
VRK1-203ENST00000555067 TMEM214Q6NUQ4 689 aaKnown RBP11.68□□□□□ -0.54
VRK1-203ENST00000555067 MYCP01106 439 aaPredicted RBP11.67□□□□□ -0.54
VRK1-203ENST00000555067 CD163Q86VB7 1156 aa11.67□□□□□ -0.54
VRK1-203ENST00000555067 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
VRK1-203ENST00000555067 AMPD1P23109 780 aa11.66□□□□□ -0.54
VRK1-203ENST00000555067 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
VRK1-203ENST00000555067 RHBDD1Q8TEB9 315 aa11.66□□□□□ -0.54
VRK1-203ENST00000555067 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
VRK1-203ENST00000555067 ARAFP10398 606 aa11.65□□□□□ -0.54
VRK1-203ENST00000555067 ITGB7P26010 798 aa11.65□□□□□ -0.54
VRK1-203ENST00000555067 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
VRK1-203ENST00000555067 CHRNA4P43681 627 aa11.65□□□□□ -0.54
VRK1-203ENST00000555067 DNAAF2Q9NVR5 837 aaKnown RBP11.65□□□□□ -0.54
VRK1-203ENST00000555067 ESCO1Q5FWF5 840 aa11.64□□□□□ -0.55
VRK1-203ENST00000555067 RNF135Q8IUD6 432 aa11.64□□□□□ -0.55
VRK1-203ENST00000555067 PRM3Q9NNZ6 103 aa11.63□□□□□ -0.55
VRK1-203ENST00000555067 PSMG3-AS1Q96PY0 264 aa11.62□□□□□ -0.55
VRK1-203ENST00000555067 ETNK1Q9HBU6 452 aa11.62□□□□□ -0.55
VRK1-203ENST00000555067 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
VRK1-203ENST00000555067 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
VRK1-203ENST00000555067 FIGNL1Q6PIW4 674 aa11.6□□□□□ -0.55
VRK1-203ENST00000555067 PHTF2Q8N3S3 785 aa11.6□□□□□ -0.55
VRK1-203ENST00000555067 ZCCHC2Q9C0B9 1178 aaKnown RBP11.6□□□□□ -0.55
VRK1-203ENST00000555067 HCN2Q9UL51 889 aa11.6□□□□□ -0.55
VRK1-203ENST00000555067 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.59□□□□□ -0.55
VRK1-203ENST00000555067 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
VRK1-203ENST00000555067 KRTAP9-2Q9BYQ4 174 aa11.59□□□□□ -0.55
VRK1-203ENST00000555067 PCDHGC4Q9Y5F7 938 aa11.59□□□□□ -0.55
VRK1-203ENST00000555067 ATP4AP20648 1035 aa11.58□□□□□ -0.56
VRK1-203ENST00000555067 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
VRK1-203ENST00000555067 CHSY3Q70JA7 882 aa11.58□□□□□ -0.56
VRK1-203ENST00000555067 NLRP8Q86W28 1048 aa11.58□□□□□ -0.56
VRK1-203ENST00000555067 KLF15Q9UIH9 416 aa11.58□□□□□ -0.56
VRK1-203ENST00000555067 TLR1Q15399 786 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms