RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 ERVV-2B6SEH9 535 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
NEK3-204ENST00000552973 CABP4P57796 275 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 DCAF5Q96JK2 942 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 COL24A1Q17RW2 1714 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
NEK3-204ENST00000552973 UTRNP46939 3433 aa15.67■□□□□ 0.1
NEK3-204ENST00000552973 MTHFSP49914 203 aa15.67■□□□□ 0.1
NEK3-204ENST00000552973 C1QTNF8P60827 252 aa15.67■□□□□ 0.1
NEK3-204ENST00000552973 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
NEK3-204ENST00000552973 ITGB4P16144 1822 aa15.66■□□□□ 0.1
NEK3-204ENST00000552973 IL13P35225 146 aa15.65■□□□□ 0.1
NEK3-204ENST00000552973 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
NEK3-204ENST00000552973 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
NEK3-204ENST00000552973 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
NEK3-204ENST00000552973 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
NEK3-204ENST00000552973 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
NEK3-204ENST00000552973 PTCD1O75127 700 aaKnown RBP15.64■□□□□ 0.09
NEK3-204ENST00000552973 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
NEK3-204ENST00000552973 MMP10P09238 476 aa15.64■□□□□ 0.09
NEK3-204ENST00000552973 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
NEK3-204ENST00000552973 AMER1Q5JTC6 1135 aaPredicted RBP15.64■□□□□ 0.09
NEK3-204ENST00000552973 NFATC2IPQ8NCF5 419 aa15.64■□□□□ 0.09
NEK3-204ENST00000552973 KIF7Q2M1P5 1343 aa15.64■□□□□ 0.09
NEK3-204ENST00000552973 ARHGEF1Q92888 912 aaKnown RBP15.63■□□□□ 0.09
NEK3-204ENST00000552973 TAF1LQ8IZX4 1826 aa15.63■□□□□ 0.09
NEK3-204ENST00000552973 KDRP35968 1356 aa15.62■□□□□ 0.09
NEK3-204ENST00000552973 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
NEK3-204ENST00000552973 HMOX1P09601 288 aa15.61■□□□□ 0.09
NEK3-204ENST00000552973 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
NEK3-204ENST00000552973 RPS6KA4O75676 772 aa15.6■□□□□ 0.09
NEK3-204ENST00000552973 RFC4P35249 363 aa15.6■□□□□ 0.09
NEK3-204ENST00000552973 RC3H1Q5TC82 1133 aaKnown RBP15.6■□□□□ 0.09
NEK3-204ENST00000552973 ZNF526Q8TF50 670 aaPredicted RBP15.6■□□□□ 0.09
NEK3-204ENST00000552973 CHD4Q14839 1912 aa15.59■□□□□ 0.09
NEK3-204ENST00000552973 NLGN1Q8N2Q7 840 aa15.59■□□□□ 0.09
NEK3-204ENST00000552973 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
NEK3-204ENST00000552973 CNTNAP4Q9C0A0 1308 aa15.59■□□□□ 0.09
NEK3-204ENST00000552973 UBR3Q6ZT12 1888 aa15.59■□□□□ 0.09
NEK3-204ENST00000552973 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
NEK3-204ENST00000552973 GYS1P13807 737 aa15.58■□□□□ 0.08
NEK3-204ENST00000552973 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
NEK3-204ENST00000552973 ATP10DQ9P241 1426 aa15.58■□□□□ 0.08
NEK3-204ENST00000552973 A0A0G2JLW4 131 aa15.57■□□□□ 0.08
NEK3-204ENST00000552973 ADRA2BP18089 450 aa15.57■□□□□ 0.08
NEK3-204ENST00000552973 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
NEK3-204ENST00000552973 SRP68Q9UHB9 627 aaKnown RBP15.57■□□□□ 0.08
NEK3-204ENST00000552973 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
NEK3-204ENST00000552973 GPBP1L1Q9HC44 474 aaPredicted RBP15.56■□□□□ 0.08
NEK3-204ENST00000552973 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
NEK3-204ENST00000552973 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
NEK3-204ENST00000552973 MTHFSDQ2M296 383 aaKnown RBP15.55■□□□□ 0.08
NEK3-204ENST00000552973 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
NEK3-204ENST00000552973 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
NEK3-204ENST00000552973 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
NEK3-204ENST00000552973 BCS1LQ9Y276 419 aa15.55■□□□□ 0.08
NEK3-204ENST00000552973 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
NEK3-204ENST00000552973 DPEP1P16444 411 aa15.54■□□□□ 0.08
NEK3-204ENST00000552973 TGFB2P61812 414 aa15.54■□□□□ 0.08
NEK3-204ENST00000552973 FKBP8Q14318 412 aa15.54■□□□□ 0.08
NEK3-204ENST00000552973 INTS5Q6P9B9 1019 aaKnown RBP15.54■□□□□ 0.08
NEK3-204ENST00000552973 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.08
NEK3-204ENST00000552973 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.08
NEK3-204ENST00000552973 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
NEK3-204ENST00000552973 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
NEK3-204ENST00000552973 FCHSD2O94868 740 aa15.51■□□□□ 0.07
NEK3-204ENST00000552973 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
NEK3-204ENST00000552973 ADCY9O60503 1353 aa15.5■□□□□ 0.07
NEK3-204ENST00000552973 GOLGB1Q14789 3259 aaKnown RBP15.5■□□□□ 0.07
NEK3-204ENST00000552973 DDR1Q08345 913 aa15.5■□□□□ 0.07
NEK3-204ENST00000552973 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
NEK3-204ENST00000552973 C10orf71Q711Q0 1435 aa15.5■□□□□ 0.07
NEK3-204ENST00000552973 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
NEK3-204ENST00000552973 KCNA3P22001 575 aa15.49■□□□□ 0.07
NEK3-204ENST00000552973 ZPR1O75312 459 aa15.48■□□□□ 0.07
NEK3-204ENST00000552973 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
NEK3-204ENST00000552973 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
NEK3-204ENST00000552973 TM4SF1P30408 202 aa15.47■□□□□ 0.07
NEK3-204ENST00000552973 CHRNA5P30532 468 aa15.47■□□□□ 0.07
NEK3-204ENST00000552973 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
NEK3-204ENST00000552973 CANXP27824 592 aaKnown RBP15.46■□□□□ 0.07
NEK3-204ENST00000552973 PIM2Q9P1W9 311 aa15.46■□□□□ 0.07
NEK3-204ENST00000552973 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
NEK3-204ENST00000552973 COL5A3P25940 1745 aaPredicted RBP15.46■□□□□ 0.06
NEK3-204ENST00000552973 KIF3CO14782 793 aa15.45■□□□□ 0.06
NEK3-204ENST00000552973 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
NEK3-204ENST00000552973 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
NEK3-204ENST00000552973 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
NEK3-204ENST00000552973 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
NEK3-204ENST00000552973 NFIXQ14938 502 aa15.44■□□□□ 0.06
NEK3-204ENST00000552973 DALRD3Q5D0E6 543 aaKnown RBP15.44■□□□□ 0.06
NEK3-204ENST00000552973 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
NEK3-204ENST00000552973 GNAT3A8MTJ3 354 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 TEFQ10587 303 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 C9orf131Q5VYM1 1079 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 BICDL1Q6ZP65 573 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
NEK3-204ENST00000552973 BCL2L12Q9HB09 334 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms