RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
RBFOX1-213ENST00000551752 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
RBFOX1-213ENST00000551752 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
RBFOX1-213ENST00000551752 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
RBFOX1-213ENST00000551752 MMP16P51512 607 aa12.22□□□□□ -0.45
RBFOX1-213ENST00000551752 FCF1Q9Y324 198 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-213ENST00000551752 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 DXOO77932 396 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 JUNDP17535 347 aa12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 QPCTQ16769 361 aa12.21□□□□□ -0.45
RBFOX1-213ENST00000551752 LILRB3O75022 631 aa12.2□□□□□ -0.46
RBFOX1-213ENST00000551752 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
RBFOX1-213ENST00000551752 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
RBFOX1-213ENST00000551752 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
RBFOX1-213ENST00000551752 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
RBFOX1-213ENST00000551752 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
RBFOX1-213ENST00000551752 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
RBFOX1-213ENST00000551752 SPHKAPQ2M3C7 1700 aa12.18□□□□□ -0.46
RBFOX1-213ENST00000551752 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
RBFOX1-213ENST00000551752 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
RBFOX1-213ENST00000551752 TRPM2O94759 1503 aa12.17□□□□□ -0.46
RBFOX1-213ENST00000551752 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
RBFOX1-213ENST00000551752 TSC1Q92574 1164 aa12.17□□□□□ -0.46
RBFOX1-213ENST00000551752 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 SLC19A1P41440 591 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 MYO5BQ9ULV0 1848 aa12.16□□□□□ -0.46
RBFOX1-213ENST00000551752 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
RBFOX1-213ENST00000551752 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
RBFOX1-213ENST00000551752 SLC26A8Q96RN1 970 aa12.15□□□□□ -0.46
RBFOX1-213ENST00000551752 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-213ENST00000551752 ADAMTS13Q76LX8 1427 aa12.14□□□□□ -0.47
RBFOX1-213ENST00000551752 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-213ENST00000551752 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
RBFOX1-213ENST00000551752 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
RBFOX1-213ENST00000551752 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
RBFOX1-213ENST00000551752 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
RBFOX1-213ENST00000551752 PTPRNQ16849 979 aa12.13□□□□□ -0.47
RBFOX1-213ENST00000551752 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-213ENST00000551752 HELBQ8NG08 1087 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-213ENST00000551752 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
RBFOX1-213ENST00000551752 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
RBFOX1-213ENST00000551752 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
RBFOX1-213ENST00000551752 SETD5Q9C0A6 1442 aa12.11□□□□□ -0.47
RBFOX1-213ENST00000551752 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
RBFOX1-213ENST00000551752 KIF1BO60333 1816 aa12.11□□□□□ -0.47
RBFOX1-213ENST00000551752 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-213ENST00000551752 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
RBFOX1-213ENST00000551752 LYPD8Q6UX82 237 aa12.1□□□□□ -0.47
RBFOX1-213ENST00000551752 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-213ENST00000551752 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
RBFOX1-213ENST00000551752 RPIAP49247 311 aa12.09□□□□□ -0.47
RBFOX1-213ENST00000551752 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
RBFOX1-213ENST00000551752 MPHOSPH9Q99550 1183 aa12.09□□□□□ -0.47
RBFOX1-213ENST00000551752 MSH6P52701 1360 aa12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 NEXMIFQ5QGS0 1516 aa12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 C19orf44Q9H6X5 657 aa12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
RBFOX1-213ENST00000551752 HSPA1LP34931 641 aa12.07□□□□□ -0.48
RBFOX1-213ENST00000551752 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
RBFOX1-213ENST00000551752 EVA1BQ9NVM1 165 aa12.07□□□□□ -0.48
RBFOX1-213ENST00000551752 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
RBFOX1-213ENST00000551752 DCCP43146 1447 aa12.06□□□□□ -0.48
RBFOX1-213ENST00000551752 TRIM26Q12899 539 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-213ENST00000551752 AMOTL2Q9Y2J4 779 aa12.06□□□□□ -0.48
RBFOX1-213ENST00000551752 ANKRD30BQ9BXX2 1392 aa12.05□□□□□ -0.48
RBFOX1-213ENST00000551752 NRXN3Q9Y4C0 1643 aa12.05□□□□□ -0.48
RBFOX1-213ENST00000551752 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
RBFOX1-213ENST00000551752 CTHP32929 405 aa12.05□□□□□ -0.48
RBFOX1-213ENST00000551752 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-213ENST00000551752 AP1G2O75843 785 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 RFC5P40937 340 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
RBFOX1-213ENST00000551752 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
RBFOX1-213ENST00000551752 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
RBFOX1-213ENST00000551752 TRIM32Q13049 653 aa12.03□□□□□ -0.48
RBFOX1-213ENST00000551752 PTCRAQ6ISU1 281 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-213ENST00000551752 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-213ENST00000551752 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.49
RBFOX1-213ENST00000551752 DISP3Q9P2K9 1392 aa12.02□□□□□ -0.49
RBFOX1-213ENST00000551752 METP08581 1390 aa12.01□□□□□ -0.49
RBFOX1-213ENST00000551752 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
RBFOX1-213ENST00000551752 PPLO60437 1756 aa12□□□□□ -0.49
RBFOX1-213ENST00000551752 ATF3P18847 181 aa12□□□□□ -0.49
RBFOX1-213ENST00000551752 TMEM259Q4ZIN3 620 aa12□□□□□ -0.49
RBFOX1-213ENST00000551752 UNC93B1Q9H1C4 597 aa12□□□□□ -0.49
RBFOX1-213ENST00000551752 MAP10Q9P2G4 905 aa12□□□□□ -0.49
RBFOX1-213ENST00000551752 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms