RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 MAP4K5Q9Y4K4 846 aa10.86□□□□□ -0.67
DEPDC4-210ENST00000551642 MLH3Q9UHC1 1453 aa10.86□□□□□ -0.67
DEPDC4-210ENST00000551642 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 NR5A1Q13285 461 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 NNTQ13423 1086 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 NR6A1Q15406 480 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 SENP2Q9HC62 589 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
DEPDC4-210ENST00000551642 CAPN5O15484 640 aaPredicted RBP10.84□□□□□ -0.67
DEPDC4-210ENST00000551642 IQGAP1P46940 1657 aa10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 ITSN2Q9NZM3 1697 aa10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 GRM5P41594 1212 aa10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 KLF16Q9BXK1 252 aaPredicted RBP10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
DEPDC4-210ENST00000551642 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
DEPDC4-210ENST00000551642 PNMA1Q8ND90 353 aa10.82□□□□□ -0.68
DEPDC4-210ENST00000551642 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
DEPDC4-210ENST00000551642 TRIM47Q96LD4 638 aa10.82□□□□□ -0.68
DEPDC4-210ENST00000551642 MED14O60244 1454 aa10.81□□□□□ -0.68
DEPDC4-210ENST00000551642 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
DEPDC4-210ENST00000551642 DEPDC5O75140 1603 aa10.81□□□□□ -0.68
DEPDC4-210ENST00000551642 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
DEPDC4-210ENST00000551642 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 TIMP2P16035 220 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 HMX1Q9NP08 348 aaPredicted RBP10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 FAM135BQ49AJ0 1406 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 LRP6O75581 1613 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 KIF14Q15058 1648 aa10.8□□□□□ -0.68
DEPDC4-210ENST00000551642 ZC3H13Q5T200 1668 aaKnown RBP10.79□□□□□ -0.68
DEPDC4-210ENST00000551642 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
DEPDC4-210ENST00000551642 CDV3Q9UKY7 258 aaKnown RBP10.79□□□□□ -0.68
DEPDC4-210ENST00000551642 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
DEPDC4-210ENST00000551642 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
DEPDC4-210ENST00000551642 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
DEPDC4-210ENST00000551642 PTK2Q05397 1052 aa10.78□□□□□ -0.68
DEPDC4-210ENST00000551642 TRIM46Q7Z4K8 759 aa10.78□□□□□ -0.68
DEPDC4-210ENST00000551642 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
DEPDC4-210ENST00000551642 NR3C2P08235 984 aa10.77□□□□□ -0.69
DEPDC4-210ENST00000551642 VASH1Q7L8A9 365 aaPredicted RBP10.77□□□□□ -0.69
DEPDC4-210ENST00000551642 BANK1Q8NDB2 785 aa10.77□□□□□ -0.69
DEPDC4-210ENST00000551642 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
DEPDC4-210ENST00000551642 ABCC1P33527 1531 aa10.77□□□□□ -0.69
DEPDC4-210ENST00000551642 ZBTB33Q86T24 672 aa10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 OCSTAMPQ9BR26 566 aa10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 CARD14Q9BXL6 1004 aa10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.76□□□□□ -0.69
DEPDC4-210ENST00000551642 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
DEPDC4-210ENST00000551642 CDK12Q9NYV4 1490 aaPredicted RBP10.75□□□□□ -0.69
DEPDC4-210ENST00000551642 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
DEPDC4-210ENST00000551642 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
DEPDC4-210ENST00000551642 EP400Q96L91 3159 aa10.74□□□□□ -0.69
DEPDC4-210ENST00000551642 SNRPBP14678 240 aaKnown RBP10.74□□□□□ -0.69
DEPDC4-210ENST00000551642 ZIC2O95409 532 aaPredicted RBP10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 BMP1P13497 986 aa10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 FSHRP23945 695 aa10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 MRPL14Q6P1L8 145 aaKnown RBP10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 ITPKCQ96DU7 683 aa10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 SLC10A4Q96EP9 437 aa10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 GJD4Q96KN9 370 aaPredicted RBP10.73□□□□□ -0.69
DEPDC4-210ENST00000551642 ANKLE2Q86XL3 938 aa10.72□□□□□ -0.69
DEPDC4-210ENST00000551642 CCDC116Q8IYX3 515 aa10.72□□□□□ -0.69
DEPDC4-210ENST00000551642 EMILIN1Q9Y6C2 1016 aa10.72□□□□□ -0.69
DEPDC4-210ENST00000551642 COL16A1Q07092 1604 aaPredicted RBP10.72□□□□□ -0.69
DEPDC4-210ENST00000551642 RGS12O14924 1447 aa10.71□□□□□ -0.69
DEPDC4-210ENST00000551642 LRP5O75197 1615 aa10.71□□□□□ -0.69
DEPDC4-210ENST00000551642 ADAM32Q8TC27 787 aa10.71□□□□□ -0.69
DEPDC4-210ENST00000551642 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
DEPDC4-210ENST00000551642 RXRBP28702 533 aa10.7□□□□□ -0.7
DEPDC4-210ENST00000551642 SCARF1Q14162 830 aa10.7□□□□□ -0.7
DEPDC4-210ENST00000551642 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
DEPDC4-210ENST00000551642 ZFP42Q96MM3 310 aa10.7□□□□□ -0.7
DEPDC4-210ENST00000551642 KCTD15Q96SI1 283 aaPredicted RBP10.7□□□□□ -0.7
DEPDC4-210ENST00000551642 SAMD9LQ8IVG5 1584 aa10.69□□□□□ -0.7
DEPDC4-210ENST00000551642 JCADQ9P266 1359 aa10.69□□□□□ -0.7
DEPDC4-210ENST00000551642 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
DEPDC4-210ENST00000551642 TREML4Q6UXN2 200 aa10.69□□□□□ -0.7
DEPDC4-210ENST00000551642 MEIOBQ8N635 442 aa10.68□□□□□ -0.7
DEPDC4-210ENST00000551642 PREX2Q70Z35 1606 aa10.68□□□□□ -0.7
DEPDC4-210ENST00000551642 UGGT1Q9NYU2 1555 aa10.68□□□□□ -0.7
DEPDC4-210ENST00000551642 TNRQ92752 1358 aa10.67□□□□□ -0.7
DEPDC4-210ENST00000551642 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
DEPDC4-210ENST00000551642 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
DEPDC4-210ENST00000551642 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
DEPDC4-210ENST00000551642 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
DEPDC4-210ENST00000551642 SHPRHQ149N8 1683 aa10.66□□□□□ -0.7
DEPDC4-210ENST00000551642 APBB1O00213 710 aa10.66□□□□□ -0.7
DEPDC4-210ENST00000551642 PPP1R26Q5T8A7 1209 aaPredicted RBP10.66□□□□□ -0.7
DEPDC4-210ENST00000551642 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
DEPDC4-210ENST00000551642 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
DEPDC4-210ENST00000551642 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
DEPDC4-210ENST00000551642 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
DEPDC4-210ENST00000551642 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
DEPDC4-210ENST00000551642 GGT6Q6P531 493 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms