RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
SCAF11-214ENST00000550893 GNRH1P01148 92 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 CLN3Q13286 438 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 IRF7Q92985 503 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 NLRP3Q96P20 1036 aa8.82□□□□□ -1
SCAF11-214ENST00000550893 SLC35F4A4IF30 521 aa8.81□□□□□ -1
SCAF11-214ENST00000550893 GPC1P35052 558 aa8.81□□□□□ -1
SCAF11-214ENST00000550893 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
SCAF11-214ENST00000550893 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
SCAF11-214ENST00000550893 SNAPC4Q5SXM2 1469 aa8.81□□□□□ -1
SCAF11-214ENST00000550893 ADAMTS12P58397 1594 aa8.81□□□□□ -1
SCAF11-214ENST00000550893 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
SCAF11-214ENST00000550893 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
SCAF11-214ENST00000550893 SENP3-EIF4A1A0A087X0R7 540 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
SCAF11-214ENST00000550893 IL2RAP01589 272 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 SKIP12755 728 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 RHOQP17081 205 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 GMPRP36959 345 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 CNKSR1Q969H4 720 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 SIRT1Q96EB6 747 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 SOGA1O94964 1423 aa8.79□□□□□ -1
SCAF11-214ENST00000550893 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
SCAF11-214ENST00000550893 VSIG8P0DPA2 414 aa8.78□□□□□ -1
SCAF11-214ENST00000550893 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
SCAF11-214ENST00000550893 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
SCAF11-214ENST00000550893 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
SCAF11-214ENST00000550893 ARHGEF11O15085 1522 aa8.78□□□□□ -1
SCAF11-214ENST00000550893 XAGE2Q96GT9 111 aa8.77□□□□□ -1.01
SCAF11-214ENST00000550893 HRH3Q9Y5N1 445 aa8.77□□□□□ -1.01
SCAF11-214ENST00000550893 MAGI1Q96QZ7 1491 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-214ENST00000550893 ITGA6P23229 1130 aa8.76□□□□□ -1.01
SCAF11-214ENST00000550893 CENPCQ03188 943 aa8.76□□□□□ -1.01
SCAF11-214ENST00000550893 POU4F2Q12837 409 aa8.76□□□□□ -1.01
SCAF11-214ENST00000550893 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
SCAF11-214ENST00000550893 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
SCAF11-214ENST00000550893 WRNQ14191 1432 aaPredicted RBP eCLIP8.76□□□□□ -1.01
SCAF11-214ENST00000550893 CEP170Q5SW79 1584 aa8.75□□□□□ -1.01
SCAF11-214ENST00000550893 A6NJR5 290 aa8.75□□□□□ -1.01
SCAF11-214ENST00000550893 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
SCAF11-214ENST00000550893 UCN2Q96RP3 112 aa8.75□□□□□ -1.01
SCAF11-214ENST00000550893 GRIN2BQ13224 1484 aa8.75□□□□□ -1.01
SCAF11-214ENST00000550893 SPATA31C2B4DYI2 1134 aa8.74□□□□□ -1.01
SCAF11-214ENST00000550893 EML3Q32P44 896 aa8.74□□□□□ -1.01
SCAF11-214ENST00000550893 DEPDC4Q8N2C3 294 aa8.74□□□□□ -1.01
SCAF11-214ENST00000550893 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
SCAF11-214ENST00000550893 GAPVD1Q14C86 1478 aa8.74□□□□□ -1.01
SCAF11-214ENST00000550893 ARAP1Q96P48 1450 aa8.74□□□□□ -1.01
SCAF11-214ENST00000550893 ERCC6L2Q5T890 1561 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 SHROOM2Q13796 1616 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 SYNJ2O15056 1496 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 SCNN1DP51172 638 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 GDF10P55107 478 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 NCOA4Q13772 614 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
SCAF11-214ENST00000550893 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
SCAF11-214ENST00000550893 NANOS1Q8WY41 292 aaKnown RBP8.73□□□□□ -1.01
SCAF11-214ENST00000550893 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-214ENST00000550893 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
SCAF11-214ENST00000550893 LZTS3O60299 673 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-214ENST00000550893 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
SCAF11-214ENST00000550893 GLMNQ92990 594 aa8.72□□□□□ -1.01
SCAF11-214ENST00000550893 CUEDC1Q9NWM3 386 aaPredicted RBP8.72□□□□□ -1.01
SCAF11-214ENST00000550893 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
SCAF11-214ENST00000550893 PCDHGA11Q9Y5H2 935 aa8.72□□□□□ -1.01
SCAF11-214ENST00000550893 CDC14CA4D256 554 aa8.71□□□□□ -1.02
SCAF11-214ENST00000550893 WASLO00401 505 aaPredicted RBP8.71□□□□□ -1.02
SCAF11-214ENST00000550893 INHAP05111 366 aa8.71□□□□□ -1.02
SCAF11-214ENST00000550893 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
SCAF11-214ENST00000550893 ERICH3Q5RHP9 1530 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 ATP9BO43861 1147 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 GTF2IP78347 998 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 TLR1Q15399 786 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
SCAF11-214ENST00000550893 PHKA2P46019 1235 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
SCAF11-214ENST00000550893 SV2AQ7L0J3 742 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 GAS2L1Q99501 681 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-214ENST00000550893 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 NUP160Q12769 1436 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 GRIN2AQ12879 1464 aa8.69□□□□□ -1.02
SCAF11-214ENST00000550893 USP17L3A6NCW0 530 aa8.68□□□□□ -1.02
SCAF11-214ENST00000550893 USP17L4A6NCW7 530 aa8.68□□□□□ -1.02
SCAF11-214ENST00000550893 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
SCAF11-214ENST00000550893 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
SCAF11-214ENST00000550893 USP17L1Q7RTZ2 530 aa8.68□□□□□ -1.02
SCAF11-214ENST00000550893 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
SCAF11-214ENST00000550893 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
SCAF11-214ENST00000550893 SMTNP53814 917 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms