RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
HCFC2-203ENST00000547194 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
HCFC2-203ENST00000547194 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
HCFC2-203ENST00000547194 BTBD11A6QL63 1104 aa6.92□□□□□ -1.3
HCFC2-203ENST00000547194 C2CD2LO14523 706 aa6.92□□□□□ -1.3
HCFC2-203ENST00000547194 BTBD6Q96KE9 485 aa6.92□□□□□ -1.3
HCFC2-203ENST00000547194 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
HCFC2-203ENST00000547194 NOP53Q9NZM5 478 aaKnown RBP6.92□□□□□ -1.3
HCFC2-203ENST00000547194 PCDHB9Q9Y5E1 797 aa6.92□□□□□ -1.3
HCFC2-203ENST00000547194 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
HCFC2-203ENST00000547194 FBXO31Q5XUX0 539 aaPredicted RBP6.91□□□□□ -1.3
HCFC2-203ENST00000547194 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
HCFC2-203ENST00000547194 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
HCFC2-203ENST00000547194 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
HCFC2-203ENST00000547194 ZFP64Q9NPA5 681 aa6.91□□□□□ -1.3
HCFC2-203ENST00000547194 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 CTBSQ01459 385 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 CC2D2BQ6DHV5 1058 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 SEPT12Q8IYM1 358 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 PGBD3Q8N328 593 aa6.9□□□□□ -1.3
HCFC2-203ENST00000547194 HMX1Q9NP08 348 aaPredicted RBP6.9□□□□□ -1.3
HCFC2-203ENST00000547194 PRKCSHP14314 528 aaPredicted RBP6.89□□□□□ -1.31
HCFC2-203ENST00000547194 FGFR3P22607 806 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 SCTRP47872 440 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 DGKGP49619 791 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 CLN3Q13286 438 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 TRIM52Q96A61 297 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
HCFC2-203ENST00000547194 ESF1Q9H501 851 aaKnown RBP6.89□□□□□ -1.31
HCFC2-203ENST00000547194 EPXP11678 715 aa6.88□□□□□ -1.31
HCFC2-203ENST00000547194 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
HCFC2-203ENST00000547194 RNF135Q8IUD6 432 aa6.88□□□□□ -1.31
HCFC2-203ENST00000547194 RSPH6AQ9H0K4 717 aa6.88□□□□□ -1.31
HCFC2-203ENST00000547194 CHSY3Q70JA7 882 aa6.87□□□□□ -1.31
HCFC2-203ENST00000547194 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
HCFC2-203ENST00000547194 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
HCFC2-203ENST00000547194 ATXN7L1Q9ULK2 861 aaPredicted RBP6.87□□□□□ -1.31
HCFC2-203ENST00000547194 A0A1B0GTH6 734 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 WDR44Q5JSH3 913 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 EFHC2Q5JST6 749 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 PROCA1Q8NCQ7 364 aaPredicted RBP6.86□□□□□ -1.31
HCFC2-203ENST00000547194 PCDHB11Q9Y5F2 797 aa6.86□□□□□ -1.31
HCFC2-203ENST00000547194 BNIP3LO60238 219 aa6.85□□□□□ -1.31
HCFC2-203ENST00000547194 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
HCFC2-203ENST00000547194 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
HCFC2-203ENST00000547194 TMEM214Q6NUQ4 689 aaKnown RBP6.85□□□□□ -1.31
HCFC2-203ENST00000547194 ZSCAN10Q96SZ4 725 aaPredicted RBP6.85□□□□□ -1.31
HCFC2-203ENST00000547194 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
HCFC2-203ENST00000547194 TPSG1Q9NRR2 321 aa6.85□□□□□ -1.31
HCFC2-203ENST00000547194 USP17L8P0C7I0 530 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 MSX1P28360 303 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 CENPCQ03188 943 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 GNASQ5JWF2 1037 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 CNKSR1Q969H4 720 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 DDRGK1Q96HY6 314 aa6.84□□□□□ -1.31
HCFC2-203ENST00000547194 DYRK3O43781 588 aa6.83□□□□□ -1.32
HCFC2-203ENST00000547194 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
HCFC2-203ENST00000547194 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
HCFC2-203ENST00000547194 IL2RAP01589 272 aa6.82□□□□□ -1.32
HCFC2-203ENST00000547194 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
HCFC2-203ENST00000547194 C4orf17Q53FE4 359 aa6.82□□□□□ -1.32
HCFC2-203ENST00000547194 PRSS36Q5K4E3 855 aa6.82□□□□□ -1.32
HCFC2-203ENST00000547194 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
HCFC2-203ENST00000547194 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
HCFC2-203ENST00000547194 ARAFP10398 606 aa6.81□□□□□ -1.32
HCFC2-203ENST00000547194 SH3D19Q5HYK7 790 aa6.81□□□□□ -1.32
HCFC2-203ENST00000547194 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
HCFC2-203ENST00000547194 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
HCFC2-203ENST00000547194 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
HCFC2-203ENST00000547194 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
HCFC2-203ENST00000547194 APBA3O96018 575 aa6.8□□□□□ -1.32
HCFC2-203ENST00000547194 ESYT1Q9BSJ8 1104 aa6.8□□□□□ -1.32
HCFC2-203ENST00000547194 ZBBXA8MT70 800 aa6.79□□□□□ -1.32
HCFC2-203ENST00000547194 CD33P20138 364 aa6.79□□□□□ -1.32
HCFC2-203ENST00000547194 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
HCFC2-203ENST00000547194 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
HCFC2-203ENST00000547194 RNF20Q5VTR2 975 aa6.79□□□□□ -1.32
HCFC2-203ENST00000547194 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.79□□□□□ -1.32
HCFC2-203ENST00000547194 TRAK2O60296 914 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 FBXO45P0C2W1 286 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 ADH6P28332 368 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 NEUROD2Q15784 382 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 PRRT3Q5FWE3 981 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 FCHSD1Q86WN1 690 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
HCFC2-203ENST00000547194 PLA2G4AP47712 749 aa6.77□□□□□ -1.33
HCFC2-203ENST00000547194 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
HCFC2-203ENST00000547194 KLF15Q9UIH9 416 aa6.77□□□□□ -1.33
HCFC2-203ENST00000547194 KHNYNO15037 678 aaKnown RBP6.76□□□□□ -1.33
HCFC2-203ENST00000547194 STAU1O95793 577 aaKnown RBP6.76□□□□□ -1.33
HCFC2-203ENST00000547194 GNRH1P01148 92 aa6.76□□□□□ -1.33
HCFC2-203ENST00000547194 ATXN7O15265 892 aaPredicted RBP6.75□□□□□ -1.33
HCFC2-203ENST00000547194 BRPF1P55201 1214 aaPredicted RBP6.75□□□□□ -1.33
HCFC2-203ENST00000547194 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms