RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
HCFC2-203ENST00000547194 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
HCFC2-203ENST00000547194 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
HCFC2-203ENST00000547194 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
HCFC2-203ENST00000547194 FOXD1Q16676 465 aa18.47■□□□□ 0.55
HCFC2-203ENST00000547194 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
HCFC2-203ENST00000547194 MSH5O43196 834 aa17.39■□□□□ 0.37
HCFC2-203ENST00000547194 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
HCFC2-203ENST00000547194 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
HCFC2-203ENST00000547194 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
HCFC2-203ENST00000547194 ADRA2BP18089 450 aa16.93■□□□□ 0.3
HCFC2-203ENST00000547194 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
HCFC2-203ENST00000547194 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
HCFC2-203ENST00000547194 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
HCFC2-203ENST00000547194 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-203ENST00000547194 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
HCFC2-203ENST00000547194 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
HCFC2-203ENST00000547194 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
HCFC2-203ENST00000547194 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
HCFC2-203ENST00000547194 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
HCFC2-203ENST00000547194 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
HCFC2-203ENST00000547194 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
HCFC2-203ENST00000547194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
HCFC2-203ENST00000547194 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
HCFC2-203ENST00000547194 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
HCFC2-203ENST00000547194 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
HCFC2-203ENST00000547194 CAPN15O75808 1086 aa13.86□□□□□ -0.19
HCFC2-203ENST00000547194 POTEHQ6S545 545 aa13.85□□□□□ -0.19
HCFC2-203ENST00000547194 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-203ENST00000547194 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
HCFC2-203ENST00000547194 DSG3P32926 999 aa13.74□□□□□ -0.21
HCFC2-203ENST00000547194 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-203ENST00000547194 ABCB7O75027 752 aa13.54□□□□□ -0.24
HCFC2-203ENST00000547194 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
HCFC2-203ENST00000547194 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
HCFC2-203ENST00000547194 KCNA4P22459 653 aa13.34□□□□□ -0.27
HCFC2-203ENST00000547194 APLP2Q06481 763 aa13.34□□□□□ -0.27
HCFC2-203ENST00000547194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
HCFC2-203ENST00000547194 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
HCFC2-203ENST00000547194 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-203ENST00000547194 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
HCFC2-203ENST00000547194 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
HCFC2-203ENST00000547194 POLA2Q14181 598 aa13.01□□□□□ -0.33
HCFC2-203ENST00000547194 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
HCFC2-203ENST00000547194 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-203ENST00000547194 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
HCFC2-203ENST00000547194 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-203ENST00000547194 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
HCFC2-203ENST00000547194 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
HCFC2-203ENST00000547194 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
HCFC2-203ENST00000547194 HAX1O00165 279 aa12.61□□□□□ -0.39
HCFC2-203ENST00000547194 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-203ENST00000547194 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
HCFC2-203ENST00000547194 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
HCFC2-203ENST00000547194 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
HCFC2-203ENST00000547194 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
HCFC2-203ENST00000547194 EVX2Q03828 476 aa12.38□□□□□ -0.43
HCFC2-203ENST00000547194 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
HCFC2-203ENST00000547194 ZBTB22O15209 634 aa12.24□□□□□ -0.45
HCFC2-203ENST00000547194 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
HCFC2-203ENST00000547194 FBLN2P98095 1184 aa12.21□□□□□ -0.45
HCFC2-203ENST00000547194 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
HCFC2-203ENST00000547194 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
HCFC2-203ENST00000547194 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
HCFC2-203ENST00000547194 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
HCFC2-203ENST00000547194 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
HCFC2-203ENST00000547194 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
HCFC2-203ENST00000547194 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
HCFC2-203ENST00000547194 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
HCFC2-203ENST00000547194 GABBR2O75899 941 aa12.05□□□□□ -0.48
HCFC2-203ENST00000547194 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
HCFC2-203ENST00000547194 LHX8Q68G74 356 aa12□□□□□ -0.49
HCFC2-203ENST00000547194 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
HCFC2-203ENST00000547194 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
HCFC2-203ENST00000547194 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
HCFC2-203ENST00000547194 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
HCFC2-203ENST00000547194 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
HCFC2-203ENST00000547194 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
HCFC2-203ENST00000547194 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
HCFC2-203ENST00000547194 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
HCFC2-203ENST00000547194 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
HCFC2-203ENST00000547194 CLCN6P51797 869 aa11.52□□□□□ -0.57
HCFC2-203ENST00000547194 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
HCFC2-203ENST00000547194 GALR2O43603 387 aaPredicted RBP11.51□□□□□ -0.57
HCFC2-203ENST00000547194 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
HCFC2-203ENST00000547194 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
HCFC2-203ENST00000547194 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
HCFC2-203ENST00000547194 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
HCFC2-203ENST00000547194 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
HCFC2-203ENST00000547194 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
HCFC2-203ENST00000547194 POTEMA6NI47 508 aa11.35□□□□□ -0.59
HCFC2-203ENST00000547194 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
HCFC2-203ENST00000547194 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
HCFC2-203ENST00000547194 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
HCFC2-203ENST00000547194 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
HCFC2-203ENST00000547194 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
HCFC2-203ENST00000547194 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
HCFC2-203ENST00000547194 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
HCFC2-203ENST00000547194 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
HCFC2-203ENST00000547194 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms