RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
SSH1-205ENST00000546812 INSRP06213 1382 aa13.02□□□□□ -0.33
SSH1-205ENST00000546812 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
SSH1-205ENST00000546812 KCNA3P22001 575 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 RRAGCQ9HB90 399 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 WDR90Q96KV7 1748 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
SSH1-205ENST00000546812 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
SSH1-205ENST00000546812 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
SSH1-205ENST00000546812 SPG7Q9UQ90 795 aa13□□□□□ -0.33
SSH1-205ENST00000546812 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
SSH1-205ENST00000546812 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
SSH1-205ENST00000546812 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
SSH1-205ENST00000546812 TESK2Q96S53 571 aa12.99□□□□□ -0.33
SSH1-205ENST00000546812 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
SSH1-205ENST00000546812 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
SSH1-205ENST00000546812 PIM2Q9P1W9 311 aa12.99□□□□□ -0.33
SSH1-205ENST00000546812 FLT4P35916 1363 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
SSH1-205ENST00000546812 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
SSH1-205ENST00000546812 GYS1P13807 737 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 ADRA2BP18089 450 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSH1-205ENST00000546812 RNF181Q9P0P0 153 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
SSH1-205ENST00000546812 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
SSH1-205ENST00000546812 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
SSH1-205ENST00000546812 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
SSH1-205ENST00000546812 RFC4P35249 363 aa12.96□□□□□ -0.33
SSH1-205ENST00000546812 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.34
SSH1-205ENST00000546812 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
SSH1-205ENST00000546812 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
SSH1-205ENST00000546812 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
SSH1-205ENST00000546812 PHKG2P15735 406 aa12.95□□□□□ -0.34
SSH1-205ENST00000546812 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
SSH1-205ENST00000546812 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
SSH1-205ENST00000546812 RPS6KA4O75676 772 aa12.94□□□□□ -0.34
SSH1-205ENST00000546812 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
SSH1-205ENST00000546812 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
SSH1-205ENST00000546812 KDRP35968 1356 aa12.94□□□□□ -0.34
SSH1-205ENST00000546812 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
SSH1-205ENST00000546812 ITGB4P16144 1822 aa12.93□□□□□ -0.34
SSH1-205ENST00000546812 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
SSH1-205ENST00000546812 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
SSH1-205ENST00000546812 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
SSH1-205ENST00000546812 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
SSH1-205ENST00000546812 EYA1Q99502 592 aa12.92□□□□□ -0.34
SSH1-205ENST00000546812 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
SSH1-205ENST00000546812 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
SSH1-205ENST00000546812 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
SSH1-205ENST00000546812 CHRNA5P30532 468 aa12.91□□□□□ -0.34
SSH1-205ENST00000546812 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
SSH1-205ENST00000546812 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.34
SSH1-205ENST00000546812 DDR1Q08345 913 aa12.9□□□□□ -0.34
SSH1-205ENST00000546812 FKBP8Q14318 412 aa12.9□□□□□ -0.34
SSH1-205ENST00000546812 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
SSH1-205ENST00000546812 WASHC2AQ641Q2 1341 aa12.89□□□□□ -0.35
SSH1-205ENST00000546812 SLC34A2O95436 690 aa12.89□□□□□ -0.35
SSH1-205ENST00000546812 LMNB1P20700 586 aa12.89□□□□□ -0.35
SSH1-205ENST00000546812 RASSF7Q02833 373 aa12.88□□□□□ -0.35
SSH1-205ENST00000546812 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
SSH1-205ENST00000546812 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
SSH1-205ENST00000546812 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
SSH1-205ENST00000546812 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
SSH1-205ENST00000546812 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
SSH1-205ENST00000546812 TM4SF1P30408 202 aa12.87□□□□□ -0.35
SSH1-205ENST00000546812 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
SSH1-205ENST00000546812 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
SSH1-205ENST00000546812 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
SSH1-205ENST00000546812 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
SSH1-205ENST00000546812 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
SSH1-205ENST00000546812 POTECB2RU33 542 aa12.85□□□□□ -0.35
SSH1-205ENST00000546812 CABP4P57796 275 aa12.85□□□□□ -0.35
SSH1-205ENST00000546812 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
SSH1-205ENST00000546812 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
SSH1-205ENST00000546812 PRDM10Q9NQV6 1147 aa12.84□□□□□ -0.35
SSH1-205ENST00000546812 FOXN1O15353 648 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
SSH1-205ENST00000546812 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.36
SSH1-205ENST00000546812 ZPR1O75312 459 aa12.82□□□□□ -0.36
SSH1-205ENST00000546812 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
SSH1-205ENST00000546812 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
SSH1-205ENST00000546812 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
SSH1-205ENST00000546812 NFKBIEO00221 500 aa12.81□□□□□ -0.36
SSH1-205ENST00000546812 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
SSH1-205ENST00000546812 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
SSH1-205ENST00000546812 SBF1O95248 1867 aa12.8□□□□□ -0.36
SSH1-205ENST00000546812 MTHFSP49914 203 aa12.8□□□□□ -0.36
SSH1-205ENST00000546812 NFIXQ14938 502 aa12.8□□□□□ -0.36
SSH1-205ENST00000546812 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms