RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 PHKG2P15735 406 aa13.3□□□□□ -0.28
C2CD3-220ENST00000544293 DPEP1P16444 411 aa13.3□□□□□ -0.28
C2CD3-220ENST00000544293 APLP1P51693 650 aa13.3□□□□□ -0.28
C2CD3-220ENST00000544293 TGFB2P61812 414 aa13.3□□□□□ -0.28
C2CD3-220ENST00000544293 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
C2CD3-220ENST00000544293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
C2CD3-220ENST00000544293 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
C2CD3-220ENST00000544293 C5P01031 1676 aa13.29□□□□□ -0.28
C2CD3-220ENST00000544293 HTRA3P83110 453 aa13.29□□□□□ -0.28
C2CD3-220ENST00000544293 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
C2CD3-220ENST00000544293 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
C2CD3-220ENST00000544293 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 GYS1P13807 737 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 TMF1P82094 1093 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 SPG7Q9UQ90 795 aa13.28□□□□□ -0.28
C2CD3-220ENST00000544293 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
C2CD3-220ENST00000544293 TRAPPC3LQ5T215 181 aa13.27□□□□□ -0.29
C2CD3-220ENST00000544293 ARHGAP27Q6ZUM4 889 aa13.27□□□□□ -0.29
C2CD3-220ENST00000544293 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
C2CD3-220ENST00000544293 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.29
C2CD3-220ENST00000544293 KDRP35968 1356 aa13.27□□□□□ -0.29
C2CD3-220ENST00000544293 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
C2CD3-220ENST00000544293 COL13A1Q5TAT6 717 aaPredicted RBP13.26□□□□□ -0.29
C2CD3-220ENST00000544293 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
C2CD3-220ENST00000544293 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
C2CD3-220ENST00000544293 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
C2CD3-220ENST00000544293 RPS6KA4O75676 772 aa13.25□□□□□ -0.29
C2CD3-220ENST00000544293 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
C2CD3-220ENST00000544293 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
C2CD3-220ENST00000544293 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
C2CD3-220ENST00000544293 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
C2CD3-220ENST00000544293 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
C2CD3-220ENST00000544293 JMYQ8N9B5 988 aa13.24□□□□□ -0.29
C2CD3-220ENST00000544293 FCHSD2O94868 740 aa13.23□□□□□ -0.29
C2CD3-220ENST00000544293 DDR1Q08345 913 aa13.23□□□□□ -0.29
C2CD3-220ENST00000544293 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
C2CD3-220ENST00000544293 KLRG1Q96E93 195 aa13.23□□□□□ -0.29
C2CD3-220ENST00000544293 CNTNAP4Q9C0A0 1308 aa13.22□□□□□ -0.29
C2CD3-220ENST00000544293 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
C2CD3-220ENST00000544293 PRELPP51888 382 aa13.22□□□□□ -0.29
C2CD3-220ENST00000544293 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
C2CD3-220ENST00000544293 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
C2CD3-220ENST00000544293 FKBP8Q14318 412 aa13.21□□□□□ -0.29
C2CD3-220ENST00000544293 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
C2CD3-220ENST00000544293 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
C2CD3-220ENST00000544293 SRP68Q9UHB9 627 aaKnown RBP13.21□□□□□ -0.29
C2CD3-220ENST00000544293 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
C2CD3-220ENST00000544293 ITGB4P16144 1822 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 TM4SF1P30408 202 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 CHRNA5P30532 468 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 RFC4P35249 363 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
C2CD3-220ENST00000544293 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
C2CD3-220ENST00000544293 FSTL1Q12841 308 aa13.18□□□□□ -0.3
C2CD3-220ENST00000544293 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
C2CD3-220ENST00000544293 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
C2CD3-220ENST00000544293 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
C2CD3-220ENST00000544293 CDCA8Q53HL2 280 aa13.17□□□□□ -0.3
C2CD3-220ENST00000544293 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
C2CD3-220ENST00000544293 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
C2CD3-220ENST00000544293 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
C2CD3-220ENST00000544293 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
C2CD3-220ENST00000544293 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
C2CD3-220ENST00000544293 NFATC2IPQ8NCF5 419 aa13.16□□□□□ -0.3
C2CD3-220ENST00000544293 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
C2CD3-220ENST00000544293 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
C2CD3-220ENST00000544293 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
C2CD3-220ENST00000544293 CABP4P57796 275 aa13.15□□□□□ -0.3
C2CD3-220ENST00000544293 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
C2CD3-220ENST00000544293 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
C2CD3-220ENST00000544293 POTECB2RU33 542 aa13.14□□□□□ -0.31
C2CD3-220ENST00000544293 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
C2CD3-220ENST00000544293 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
C2CD3-220ENST00000544293 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
C2CD3-220ENST00000544293 MTHFSP49914 203 aa13.13□□□□□ -0.31
C2CD3-220ENST00000544293 RASSF7Q02833 373 aa13.13□□□□□ -0.31
C2CD3-220ENST00000544293 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
C2CD3-220ENST00000544293 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
C2CD3-220ENST00000544293 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
C2CD3-220ENST00000544293 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
C2CD3-220ENST00000544293 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
C2CD3-220ENST00000544293 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
C2CD3-220ENST00000544293 NFIXQ14938 502 aa13.11□□□□□ -0.31
C2CD3-220ENST00000544293 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
C2CD3-220ENST00000544293 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
C2CD3-220ENST00000544293 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
C2CD3-220ENST00000544293 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
C2CD3-220ENST00000544293 CAPN15O75808 1086 aa13.1□□□□□ -0.31
C2CD3-220ENST00000544293 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
C2CD3-220ENST00000544293 PCNTO95613 3336 aa13.1□□□□□ -0.31
C2CD3-220ENST00000544293 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
C2CD3-220ENST00000544293 NFKBIEO00221 500 aa13.09□□□□□ -0.31
C2CD3-220ENST00000544293 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
C2CD3-220ENST00000544293 IL13P35225 146 aa13.09□□□□□ -0.31
C2CD3-220ENST00000544293 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
C2CD3-220ENST00000544293 PANK3Q9H999 370 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms