RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
MDM2-228ENST00000542502 A0A1B0GTH6 734 aa8.85□□□□□ -0.99
MDM2-228ENST00000542502 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
MDM2-228ENST00000542502 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
MDM2-228ENST00000542502 NEDD1Q8NHV4 660 aa8.85□□□□□ -0.99
MDM2-228ENST00000542502 CFHR5Q9BXR6 569 aa8.85□□□□□ -0.99
MDM2-228ENST00000542502 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
MDM2-228ENST00000542502 CNTNAP5Q8WYK1 1306 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 PHF20L1A8MW92 1017 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 THBS1P07996 1170 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
MDM2-228ENST00000542502 PHKA2P46019 1235 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 USP4Q13107 963 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 BEND7Q8N7W2 519 aaPredicted RBP8.84□□□□□ -0.99
MDM2-228ENST00000542502 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
MDM2-228ENST00000542502 IRF5Q13568 498 aa8.83□□□□□ -1
MDM2-228ENST00000542502 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
MDM2-228ENST00000542502 GNASQ5JWF2 1037 aa8.83□□□□□ -1
MDM2-228ENST00000542502 TMEM214Q6NUQ4 689 aaKnown RBP8.83□□□□□ -1
MDM2-228ENST00000542502 PODNQ7Z5L7 613 aa8.83□□□□□ -1
MDM2-228ENST00000542502 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
MDM2-228ENST00000542502 MAP2K3P46734 347 aa8.82□□□□□ -1
MDM2-228ENST00000542502 LBRQ14739 615 aaKnown RBP8.82□□□□□ -1
MDM2-228ENST00000542502 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
MDM2-228ENST00000542502 C4orf17Q53FE4 359 aa8.82□□□□□ -1
MDM2-228ENST00000542502 PHF24Q9UPV7 400 aa8.82□□□□□ -1
MDM2-228ENST00000542502 OIP5O43482 229 aa8.81□□□□□ -1
MDM2-228ENST00000542502 RNF135Q8IUD6 432 aa8.81□□□□□ -1
MDM2-228ENST00000542502 OXCT2Q9BYC2 517 aaPredicted RBP8.81□□□□□ -1
MDM2-228ENST00000542502 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
MDM2-228ENST00000542502 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
MDM2-228ENST00000542502 CSB-PGBD3P0DP91 1061 aa8.8□□□□□ -1
MDM2-228ENST00000542502 UBAP2LQ14157 1087 aaKnown RBP8.8□□□□□ -1
MDM2-228ENST00000542502 PGBD3Q8N328 593 aa8.8□□□□□ -1
MDM2-228ENST00000542502 DCAF5Q96JK2 942 aa8.8□□□□□ -1
MDM2-228ENST00000542502 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
MDM2-228ENST00000542502 PPARGC1BQ86YN6 1023 aaKnown RBP8.79□□□□□ -1
MDM2-228ENST00000542502 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
MDM2-228ENST00000542502 SIRT1Q96EB6 747 aa8.79□□□□□ -1
MDM2-228ENST00000542502 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
MDM2-228ENST00000542502 MSX1P28360 303 aa8.78□□□□□ -1
MDM2-228ENST00000542502 TLR1Q15399 786 aa8.78□□□□□ -1
MDM2-228ENST00000542502 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
MDM2-228ENST00000542502 KLRG1Q96E93 195 aa8.78□□□□□ -1
MDM2-228ENST00000542502 RUBCNLQ9H714 662 aa8.78□□□□□ -1
MDM2-228ENST00000542502 VAC14Q08AM6 782 aa8.77□□□□□ -1.01
MDM2-228ENST00000542502 PLA2G4EQ3MJ16 856 aa8.77□□□□□ -1.01
MDM2-228ENST00000542502 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
MDM2-228ENST00000542502 ATXN7L1Q9ULK2 861 aaPredicted RBP8.77□□□□□ -1.01
MDM2-228ENST00000542502 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
MDM2-228ENST00000542502 GDF2Q9UK05 429 aaPredicted RBP8.76□□□□□ -1.01
MDM2-228ENST00000542502 SCNN1DP51172 638 aa8.75□□□□□ -1.01
MDM2-228ENST00000542502 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
MDM2-228ENST00000542502 CRISPLD1Q9H336 500 aa8.75□□□□□ -1.01
MDM2-228ENST00000542502 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 MSTNO14793 375 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 INHAP05111 366 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 ABL2P42684 1182 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 MAP7D1Q3KQU3 841 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
MDM2-228ENST00000542502 ABHD17AQ96GS6 310 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 NDFIP2Q9NV92 336 aa8.74□□□□□ -1.01
MDM2-228ENST00000542502 BNIP3LO60238 219 aa8.73□□□□□ -1.01
MDM2-228ENST00000542502 ITGB2P05107 769 aa8.73□□□□□ -1.01
MDM2-228ENST00000542502 GDF10P55107 478 aa8.73□□□□□ -1.01
MDM2-228ENST00000542502 SNRPNP63162 240 aaKnown RBP8.73□□□□□ -1.01
MDM2-228ENST00000542502 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
MDM2-228ENST00000542502 GOLGA6L1Q8N7Z2 621 aa8.73□□□□□ -1.01
MDM2-228ENST00000542502 C2CD2LO14523 706 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 BMP4P12644 408 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 FGFR3P22607 806 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 EDARADDQ8WWZ3 215 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
MDM2-228ENST00000542502 SOX11P35716 441 aa8.71□□□□□ -1.02
MDM2-228ENST00000542502 SMTNP53814 917 aa8.71□□□□□ -1.02
MDM2-228ENST00000542502 FIGNL1Q6PIW4 674 aa8.71□□□□□ -1.02
MDM2-228ENST00000542502 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
MDM2-228ENST00000542502 NIFKQ9BYG3 293 aaKnown RBP8.71□□□□□ -1.02
MDM2-228ENST00000542502 CTBSQ01459 385 aa8.7□□□□□ -1.02
MDM2-228ENST00000542502 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
MDM2-228ENST00000542502 SLCO4C1Q6ZQN7 724 aa8.7□□□□□ -1.02
MDM2-228ENST00000542502 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
MDM2-228ENST00000542502 PROCP04070 461 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 ATP4AP20648 1035 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 NLRP8Q86W28 1048 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
MDM2-228ENST00000542502 RRAGCQ9HB90 399 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 PCDHGC4Q9Y5F7 938 aa8.69□□□□□ -1.02
MDM2-228ENST00000542502 ALYREFQ86V81 257 aaKnown RBP8.68□□□□□ -1.02
MDM2-228ENST00000542502 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
MDM2-228ENST00000542502 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
MDM2-228ENST00000542502 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
MDM2-228ENST00000542502 ARAFP10398 606 aa8.67□□□□□ -1.02
MDM2-228ENST00000542502 MCM6Q14566 821 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms