RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 KANK4Q5T7N3 995 aaPredicted RBP6.66□□□□□ -1.34
MDM1-206ENST00000536313 TYW1BQ6NUM6 668 aa6.66□□□□□ -1.34
MDM1-206ENST00000536313 GGT6Q6P531 493 aa6.66□□□□□ -1.34
MDM1-206ENST00000536313 ZCRB1Q8TBF4 217 aaKnown RBP6.66□□□□□ -1.34
MDM1-206ENST00000536313 TINF2Q9BSI4 451 aa6.66□□□□□ -1.34
MDM1-206ENST00000536313 TERF2IPQ9NYB0 399 aa6.66□□□□□ -1.34
MDM1-206ENST00000536313 NOVA2Q9UNW9 492 aaKnown RBP6.66□□□□□ -1.34
MDM1-206ENST00000536313 FAN1Q9Y2M0 1017 aa6.66□□□□□ -1.34
MDM1-206ENST00000536313 VWDEQ8N2E2 1590 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 ZNF142P52746 1687 aaPredicted RBP6.65□□□□□ -1.34
MDM1-206ENST00000536313 MYO5CQ9NQX4 1742 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 LILRB3O75022 631 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 TBC1D9Q6ZT07 1266 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 NLGN1Q8N2Q7 840 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 DHX38Q92620 1227 aaKnown RBP6.65□□□□□ -1.34
MDM1-206ENST00000536313 DDX12PQ92771 950 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 EPAS1Q99814 870 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 SLC4A5Q9BY07 1137 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 CHPF2Q9P2E5 772 aa6.65□□□□□ -1.34
MDM1-206ENST00000536313 LAS1LQ9Y4W2 734 aaKnown RBP6.65□□□□□ -1.34
MDM1-206ENST00000536313 SPAG9O60271 1321 aaKnown RBP6.65□□□□□ -1.35
MDM1-206ENST00000536313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.65□□□□□ -1.35
MDM1-206ENST00000536313 KIDINS220Q9ULH0 1771 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 HNRNPMP52272 730 aaKnown RBP eCLIP6.64□□□□□ -1.35
MDM1-206ENST00000536313 MRPL58Q14197 206 aaKnown RBP6.64□□□□□ -1.35
MDM1-206ENST00000536313 ZBED2Q9BTP6 218 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 VPS9D1Q9Y2B5 631 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 CLIP1P30622 1438 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 SAMD9LQ8IVG5 1584 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 DNMT1P26358 1616 aaKnown RBP6.64□□□□□ -1.35
MDM1-206ENST00000536313 MROH2AA6NES4 1674 aa6.64□□□□□ -1.35
MDM1-206ENST00000536313 NPHP4O75161 1426 aaPredicted RBP6.63□□□□□ -1.35
MDM1-206ENST00000536313 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
MDM1-206ENST00000536313 TCEAL1Q15170 157 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 C9orf131Q5VYM1 1079 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 FMN1Q68DA7 1419 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 RSBN1LQ6PCB5 846 aaPredicted RBP6.63□□□□□ -1.35
MDM1-206ENST00000536313 METTL3Q86U44 580 aaKnown RBP6.63□□□□□ -1.35
MDM1-206ENST00000536313 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 SPIRE2Q8WWL2 714 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
MDM1-206ENST00000536313 SGSM3Q96HU1 749 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 ASB16Q96NS5 453 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 PIF1Q9H611 641 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 NPDC1Q9NQX5 325 aaPredicted RBP6.63□□□□□ -1.35
MDM1-206ENST00000536313 SLAIN2Q9P270 581 aa6.63□□□□□ -1.35
MDM1-206ENST00000536313 PLXNC1O60486 1568 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 A2MP01023 1474 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 TNRQ92752 1358 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 PPP1R3GB7ZBB8 358 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 CREB3O43889 395 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 OATP04181 439 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 GJA5P36382 358 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 SEMA3FQ13275 785 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 QPCTQ16769 361 aa6.62□□□□□ -1.35
MDM1-206ENST00000536313 CLTCQ00610 1675 aaKnown RBP6.61□□□□□ -1.35
MDM1-206ENST00000536313 MED14O60244 1454 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 ARHGAP35Q9NRY4 1499 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 U2SURPO15042 1029 aaKnown RBP6.61□□□□□ -1.35
MDM1-206ENST00000536313 RBL2Q08999 1139 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
MDM1-206ENST00000536313 RTL5Q5HYW3 569 aaPredicted RBP6.61□□□□□ -1.35
MDM1-206ENST00000536313 RNF187Q5TA31 235 aaPredicted RBP6.61□□□□□ -1.35
MDM1-206ENST00000536313 SOGA3Q5TF21 947 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 NME8Q8N427 588 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 PMM1Q92871 262 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 CCDC136Q96JN2 1154 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 STAC3Q96MF2 364 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 GMLQ99445 158 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 TRIM34Q9BYJ4 488 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 PRDM10Q9NQV6 1147 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 EGFL7Q9UHF1 273 aa6.61□□□□□ -1.35
MDM1-206ENST00000536313 SYCP2Q9BX26 1530 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 CDC42BPBQ9Y5S2 1711 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 COL9A1P20849 921 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 HSD3B2P26439 372 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 METTL16Q86W50 562 aaKnown RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 CCAR1Q8IX12 1150 aaKnown RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 GPATCH11Q8N954 259 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 NAP1L5Q96NT1 182 aaPredicted RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 TGIF2Q9GZN2 237 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 IQSEC3Q9UPP2 1182 aaPredicted RBP6.6□□□□□ -1.35
MDM1-206ENST00000536313 ITSN2Q9NZM3 1697 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 PREX2Q70Z35 1606 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 ATP7AQ04656 1500 aa6.6□□□□□ -1.35
MDM1-206ENST00000536313 FAM196BA6NMK8 535 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 BHMG1C9JSJ3 638 aaPredicted RBP6.59□□□□□ -1.35
MDM1-206ENST00000536313 PPFIA4O75335 1185 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 ATP2B4P23634 1241 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 EN1Q05925 392 aaPredicted RBP6.59□□□□□ -1.35
MDM1-206ENST00000536313 CSPP1Q1MSJ5 1256 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
MDM1-206ENST00000536313 C6orf132Q5T0Z8 1188 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 LDLRAD1Q5T700 205 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms