RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 FKBPLQ9UIM3 349 aa5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 ZFYVE16Q7Z3T8 1539 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 GOLGA3Q08378 1498 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 RNF225M0QZC1 329 aaPredicted RBP5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 RAB15P59190 212 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 PTK2Q05397 1052 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 KCNMA1Q12791 1236 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 POTEAQ6S8J7 498 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 TMEM151AQ8N4L1 468 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 SVOPQ8N4V2 548 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 LRRN4Q8WUT4 740 aa5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 ESF1Q9H501 851 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-208ENST00000534106 ABCA9Q8IUA7 1624 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 ARHGEF40Q8TER5 1519 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 ARHGEF12Q9NZN5 1544 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 NCOA1Q15788 1441 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 TRAPPC8Q9Y2L5 1435 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 SPINT1O43278 529 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 TOM1O60784 492 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 NR6A1Q15406 480 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 EFCAB2Q5VUJ9 269 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 Q6ZVU0 165 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 SV2AQ7L0J3 742 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 VWA5B2Q8N398 1253 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 PNMA1Q8ND90 353 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 AGBL1Q96MI9 1066 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 HECW1Q76N89 1606 aa5.08□□□□□ -1.6
CHMP4A-208ENST00000534106 AP1G2O75843 785 aa5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 GDF11O95390 407 aa5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 MARSP56192 900 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 INTS6LQ5JSJ4 861 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 DZIP3Q86Y13 1208 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 INSM2Q96T92 566 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 ZNF395Q9H8N7 513 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 ADAMTS8Q9UP79 889 aa5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 MED1Q15648 1581 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 NUP153P49790 1475 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-208ENST00000534106 C9orf84Q5VXU9 1444 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 ZC3H4Q9UPT8 1303 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 SLC35F4A4IF30 521 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 CTSOP43234 321 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 KRT76Q01546 638 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 RASSF7Q02833 373 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 SKIV2LQ15477 1246 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 NBPF20Q3BBV1 942 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 NANOS1Q8WY41 292 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 TTC37Q6PGP7 1564 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 MAGI2Q86UL8 1455 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 PLCH2O75038 1416 aa5.06□□□□□ -1.6
CHMP4A-208ENST00000534106 ZMYM3Q14202 1370 aa5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 ITGA6P23229 1130 aa5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 FBXO31Q5XUX0 539 aaPredicted RBP5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 ADAM32Q8TC27 787 aa5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 TMPRSS4Q9NRS4 437 aa5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 IQSEC2Q5JU85 1478 aa5.05□□□□□ -1.6
CHMP4A-208ENST00000534106 RICTORQ6R327 1708 aa5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 SUZ12Q15022 739 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 ZNF385CQ66K41 422 aaPredicted RBP5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 GGT6Q6P531 493 aa5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 PROCA1Q8NCQ7 364 aaPredicted RBP5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 TRIM52Q96A61 297 aa5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 PRXQ9BXM0 1461 aa5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 CAMSAP1Q5T5Y3 1602 aa5.04□□□□□ -1.6
CHMP4A-208ENST00000534106 EFCAB5A4FU69 1503 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 ZMYM4Q5VZL5 1548 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 PREX1Q8TCU6 1659 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 IRS1P35568 1242 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 MAP3K10Q02779 954 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 RNFT1Q5M7Z0 435 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 ZNF784Q8NCA9 323 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 RNF217Q8TC41 542 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 DDRGK1Q96HY6 314 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 GPSM3Q9Y4H4 160 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 FER1L4A9Z1Z3 1794 aa5.03□□□□□ -1.6
CHMP4A-208ENST00000534106 ERVH48-1M5A8F1 160 aa5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 ADH1AP07327 375 aa5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 HNRNPMP52272 730 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 SH3D19Q5HYK7 790 aa5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 LYSMD3Q7Z3D4 306 aa5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 SCARF2Q96GP6 870 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 ZNF777Q9ULD5 760 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-208ENST00000534106 PTGIRP43119 386 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 PPP2R2DQ66LE6 453 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 PRICKLE2Q7Z3G6 844 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 EPS8L1Q8TE68 723 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 WHAMMQ8TF30 809 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 KDM4CQ9H3R0 1056 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 RAPGEF6Q8TEU7 1601 aa5.01□□□□□ -1.61
CHMP4A-208ENST00000534106 SETD1BQ9UPS6 1966 aaKnown RBP5□□□□□ -1.61
CHMP4A-208ENST00000534106 ADAMTS2O95450 1211 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 USP17L8P0C7I0 530 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 RHOQP17081 205 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 ADD1P35611 737 aaKnown RBP5□□□□□ -1.61
CHMP4A-208ENST00000534106 GSK3AP49840 483 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 GPAT2Q6NUI2 795 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 FOXR1Q6PIV2 292 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 OCSTAMPQ9BR26 566 aa5□□□□□ -1.61
CHMP4A-208ENST00000534106 GNL3Q9BVP2 549 aaKnown RBP eCLIP5□□□□□ -1.61
CHMP4A-208ENST00000534106 FAM117AQ9C073 453 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms