RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 COL17A1Q9UMD9 1497 aaPredicted RBP8.08□□□□□ -1.12
CHKA-208ENST00000533910 LAMC1P11047 1609 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 NR6A1Q15406 480 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 IFT172Q9UG01 1749 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 KIF1BO60333 1816 aa8.08□□□□□ -1.12
CHKA-208ENST00000533910 PIK3C2BO00750 1634 aa8.07□□□□□ -1.12
CHKA-208ENST00000533910 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
CHKA-208ENST00000533910 KIF3BO15066 747 aa8.07□□□□□ -1.12
CHKA-208ENST00000533910 HELBQ8NG08 1087 aaPredicted RBP8.07□□□□□ -1.12
CHKA-208ENST00000533910 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
CHKA-208ENST00000533910 MROH2AA6NES4 1674 aa8.07□□□□□ -1.12
CHKA-208ENST00000533910 ARHGAP31Q2M1Z3 1444 aa8.06□□□□□ -1.12
CHKA-208ENST00000533910 NRG2O14511 850 aaPredicted RBP8.06□□□□□ -1.12
CHKA-208ENST00000533910 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
CHKA-208ENST00000533910 RFX1P22670 979 aa8.06□□□□□ -1.12
CHKA-208ENST00000533910 MORN1Q5T089 497 aa8.06□□□□□ -1.12
CHKA-208ENST00000533910 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
CHKA-208ENST00000533910 MADDQ8WXG6 1647 aa8.06□□□□□ -1.12
CHKA-208ENST00000533910 NPATQ14207 1427 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 ADGRB3O60242 1522 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
CHKA-208ENST00000533910 RETREG2Q8NC44 543 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 SYNMO15061 1565 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 PREX1Q8TCU6 1659 aa8.05□□□□□ -1.12
CHKA-208ENST00000533910 PRAG1Q86YV5 1406 aa8.04□□□□□ -1.12
CHKA-208ENST00000533910 CNTLNQ9NXG0 1405 aa8.04□□□□□ -1.12
CHKA-208ENST00000533910 SOCS7O14512 581 aa8.04□□□□□ -1.12
CHKA-208ENST00000533910 UGGT1Q9NYU2 1555 aa8.04□□□□□ -1.12
CHKA-208ENST00000533910 NOS1P29475 1434 aa8.03□□□□□ -1.12
CHKA-208ENST00000533910 KIAA1210Q9ULL0 1709 aa8.03□□□□□ -1.12
CHKA-208ENST00000533910 MYOM2P54296 1465 aa8.03□□□□□ -1.12
CHKA-208ENST00000533910 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
CHKA-208ENST00000533910 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
CHKA-208ENST00000533910 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
CHKA-208ENST00000533910 PPLO60437 1756 aa8.02□□□□□ -1.13
CHKA-208ENST00000533910 CLTCQ00610 1675 aaKnown RBP8.02□□□□□ -1.13
CHKA-208ENST00000533910 NR1I2O75469 434 aa8.02□□□□□ -1.13
CHKA-208ENST00000533910 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
CHKA-208ENST00000533910 GPRASP1Q5JY77 1395 aa8.01□□□□□ -1.13
CHKA-208ENST00000533910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
CHKA-208ENST00000533910 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
CHKA-208ENST00000533910 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
CHKA-208ENST00000533910 IQGAP1P46940 1657 aa8.01□□□□□ -1.13
CHKA-208ENST00000533910 NRXN1Q9ULB1 1477 aa8□□□□□ -1.13
CHKA-208ENST00000533910 CFAP65Q6ZU64 1925 aaKnown RBP8□□□□□ -1.13
CHKA-208ENST00000533910 RNF223E7ERA6 249 aa8□□□□□ -1.13
CHKA-208ENST00000533910 CDCA8Q53HL2 280 aa8□□□□□ -1.13
CHKA-208ENST00000533910 SPATA31D1Q6ZQQ2 1576 aa8□□□□□ -1.13
CHKA-208ENST00000533910 SLC19A1P41440 591 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 WASHC4Q2M389 1173 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 CFAP70Q5T0N1 1121 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 ANKLE1Q8NAG6 615 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 ALG2Q9H553 416 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 ERVK-7P63135 1459 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 WASHC2CQ9Y4E1 1318 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 MYO5BQ9ULV0 1848 aa7.99□□□□□ -1.13
CHKA-208ENST00000533910 USP47Q96K76 1375 aa7.98□□□□□ -1.13
CHKA-208ENST00000533910 TLL1O43897 1013 aa7.98□□□□□ -1.13
CHKA-208ENST00000533910 EIF4G2P78344 907 aaKnown RBP eCLIP7.98□□□□□ -1.13
CHKA-208ENST00000533910 GGT6Q6P531 493 aa7.98□□□□□ -1.13
CHKA-208ENST00000533910 TMEM131LA2VDJ0 1609 aa7.98□□□□□ -1.13
CHKA-208ENST00000533910 ADH1BP00325 375 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 HSPA5P11021 654 aaKnown RBP7.97□□□□□ -1.13
CHKA-208ENST00000533910 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 SCUBE3Q8IX30 993 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 DCAF11Q8TEB1 546 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 UCN2Q96RP3 112 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 TRAIPQ9BWF2 469 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 PPP1R12CQ9BZL4 782 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 KDM5AP29375 1690 aaKnown RBP7.97□□□□□ -1.13
CHKA-208ENST00000533910 NEXMIFQ5QGS0 1516 aa7.97□□□□□ -1.13
CHKA-208ENST00000533910 ZBTB7CA1YPR0 619 aa7.96□□□□□ -1.14
CHKA-208ENST00000533910 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
CHKA-208ENST00000533910 S1PR4O95977 384 aa7.96□□□□□ -1.14
CHKA-208ENST00000533910 Q3C1V9 767 aa7.96□□□□□ -1.14
CHKA-208ENST00000533910 LYPD8Q6UX82 237 aa7.96□□□□□ -1.14
CHKA-208ENST00000533910 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
CHKA-208ENST00000533910 TFIP11Q9UBB9 837 aaKnown RBP7.96□□□□□ -1.14
CHKA-208ENST00000533910 SETBP1Q9Y6X0 1596 aa7.96□□□□□ -1.14
CHKA-208ENST00000533910 ROCK2O75116 1388 aaKnown RBP7.96□□□□□ -1.14
CHKA-208ENST00000533910 FER1L4A9Z1Z3 1794 aa7.95□□□□□ -1.14
CHKA-208ENST00000533910 PALM3A6NDB9 673 aaPredicted RBP7.95□□□□□ -1.14
CHKA-208ENST00000533910 LMOD1P29536 600 aaPredicted RBP7.95□□□□□ -1.14
CHKA-208ENST00000533910 THAP11Q96EK4 314 aa7.95□□□□□ -1.14
CHKA-208ENST00000533910 SLC6A16Q9GZN6 736 aa7.95□□□□□ -1.14
CHKA-208ENST00000533910 MYO3AQ8NEV4 1616 aa7.95□□□□□ -1.14
CHKA-208ENST00000533910 SRPK2P78362 688 aaKnown RBP7.94□□□□□ -1.14
CHKA-208ENST00000533910 RGL3Q3MIN7 710 aa7.94□□□□□ -1.14
CHKA-208ENST00000533910 ZNF326Q5BKZ1 582 aaKnown RBP7.94□□□□□ -1.14
CHKA-208ENST00000533910 SPRYD7Q5W111 196 aa7.94□□□□□ -1.14
CHKA-208ENST00000533910 TBC1D9Q6ZT07 1266 aa7.94□□□□□ -1.14
CHKA-208ENST00000533910 ZNF598Q86UK7 904 aaKnown RBP7.94□□□□□ -1.14
CHKA-208ENST00000533910 CCDC7Q96M83 1385 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms