RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RFC4P35249 363 aa12.79□□□□□ -0.36
NEDD8-206ENST00000531430 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
NEDD8-206ENST00000531430 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
NEDD8-206ENST00000531430 ADCY9O60503 1353 aa12.79□□□□□ -0.36
NEDD8-206ENST00000531430 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 TOMM70O94826 608 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 TGFB2P61812 414 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
NEDD8-206ENST00000531430 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 ITGB4P16144 1822 aa12.78□□□□□ -0.36
NEDD8-206ENST00000531430 CABP4P57796 275 aa12.76□□□□□ -0.37
NEDD8-206ENST00000531430 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
NEDD8-206ENST00000531430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.376e-8■■□□□ 11.8
NEDD8-206ENST00000531430 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
NEDD8-206ENST00000531430 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
NEDD8-206ENST00000531430 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
NEDD8-206ENST00000531430 HTRA3P83110 453 aa12.75□□□□□ -0.37
NEDD8-206ENST00000531430 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
NEDD8-206ENST00000531430 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
NEDD8-206ENST00000531430 EIF4A2Q14240 407 aaKnown RBP12.74□□□□□ -0.37
NEDD8-206ENST00000531430 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-206ENST00000531430 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 CAPN15O75808 1086 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 GYS1P13807 737 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 DNAJC5GQ8N7S2 189 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
NEDD8-206ENST00000531430 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
NEDD8-206ENST00000531430 MTHFSP49914 203 aa12.72□□□□□ -0.37
NEDD8-206ENST00000531430 DALRD3Q5D0E6 543 aaKnown RBP12.72□□□□□ -0.37
NEDD8-206ENST00000531430 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
NEDD8-206ENST00000531430 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-206ENST00000531430 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
NEDD8-206ENST00000531430 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
NEDD8-206ENST00000531430 SRP68Q9UHB9 627 aaKnown RBP12.72□□□□□ -0.37
NEDD8-206ENST00000531430 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
NEDD8-206ENST00000531430 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
NEDD8-206ENST00000531430 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-206ENST00000531430 ADRA2BP18089 450 aa12.71□□□□□ -0.37
NEDD8-206ENST00000531430 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
NEDD8-206ENST00000531430 CHRNA5P30532 468 aa12.7□□□□□ -0.38
NEDD8-206ENST00000531430 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
NEDD8-206ENST00000531430 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-206ENST00000531430 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
NEDD8-206ENST00000531430 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
NEDD8-206ENST00000531430 KCNA3P22001 575 aa12.69□□□□□ -0.38
NEDD8-206ENST00000531430 FKBP8Q14318 412 aa12.69□□□□□ -0.38
NEDD8-206ENST00000531430 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
NEDD8-206ENST00000531430 ZPR1O75312 459 aa12.68□□□□□ -0.38
NEDD8-206ENST00000531430 CRKLP46109 303 aaKnown RBP12.68□□□□□ -0.38
NEDD8-206ENST00000531430 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
NEDD8-206ENST00000531430 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
NEDD8-206ENST00000531430 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
NEDD8-206ENST00000531430 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-206ENST00000531430 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
NEDD8-206ENST00000531430 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 FSTL1Q12841 308 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 PANK3Q9H999 370 aa12.66□□□□□ -0.38
NEDD8-206ENST00000531430 DDR1Q08345 913 aa12.65□□□□□ -0.38
NEDD8-206ENST00000531430 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
NEDD8-206ENST00000531430 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
NEDD8-206ENST00000531430 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
NEDD8-206ENST00000531430 KDRP35968 1356 aa12.64□□□□□ -0.39
NEDD8-206ENST00000531430 RASSF7Q02833 373 aa12.63□□□□□ -0.39
NEDD8-206ENST00000531430 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
NEDD8-206ENST00000531430 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
NEDD8-206ENST00000531430 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
NEDD8-206ENST00000531430 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-206ENST00000531430 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
NEDD8-206ENST00000531430 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
NEDD8-206ENST00000531430 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
NEDD8-206ENST00000531430 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
NEDD8-206ENST00000531430 TM4SF1P30408 202 aa12.62□□□□□ -0.39
NEDD8-206ENST00000531430 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
NEDD8-206ENST00000531430 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
NEDD8-206ENST00000531430 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
NEDD8-206ENST00000531430 KIF13BQ9NQT8 1826 aa12.61□□□□□ -0.39
NEDD8-206ENST00000531430 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
NEDD8-206ENST00000531430 LGR6Q9HBX8 967 aa12.61□□□□□ -0.39
NEDD8-206ENST00000531430 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
NEDD8-206ENST00000531430 SERPINB2P05120 415 aa12.6□□□□□ -0.39
NEDD8-206ENST00000531430 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-206ENST00000531430 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
NEDD8-206ENST00000531430 NFIXQ14938 502 aa12.6□□□□□ -0.39
NEDD8-206ENST00000531430 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.391e-16■□□□□ 9.9
NEDD8-206ENST00000531430 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-206ENST00000531430 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 H0YIN7 160 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 HMOX1P09601 288 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 LMNB1P20700 586 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-206ENST00000531430 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms