RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
NFRKB-208ENST00000531318 NSD3Q9BZ95 1437 aa10.29□□□□□ -0.76
NFRKB-208ENST00000531318 MYH14Q7Z406 1995 aaKnown RBP10.28□□□□□ -0.76
NFRKB-208ENST00000531318 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
NFRKB-208ENST00000531318 DSG3P32926 999 aa10.28□□□□□ -0.76
NFRKB-208ENST00000531318 SIK1P57059 783 aa10.28□□□□□ -0.76
NFRKB-208ENST00000531318 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
NFRKB-208ENST00000531318 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
NFRKB-208ENST00000531318 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.76
NFRKB-208ENST00000531318 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.76
NFRKB-208ENST00000531318 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
NFRKB-208ENST00000531318 SSFA2P28290 1259 aa10.27□□□□□ -0.77
NFRKB-208ENST00000531318 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
NFRKB-208ENST00000531318 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
NFRKB-208ENST00000531318 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.77
NFRKB-208ENST00000531318 CICQ96RK0 1608 aaPredicted RBP10.26□□□□□ -0.77
NFRKB-208ENST00000531318 CCDC88AQ3V6T2 1871 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 KIF3CO14782 793 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 MMP10P09238 476 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 ITPK1Q13572 414 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 POLR3GLQ9BT43 218 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 BCS1LQ9Y276 419 aa10.26□□□□□ -0.77
NFRKB-208ENST00000531318 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
NFRKB-208ENST00000531318 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
NFRKB-208ENST00000531318 VIRMAQ69YN4 1812 aaKnown RBP10.25□□□□□ -0.77
NFRKB-208ENST00000531318 ARFGEF1Q9Y6D6 1849 aa10.25□□□□□ -0.77
NFRKB-208ENST00000531318 C4AP0C0L4 1744 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
NFRKB-208ENST00000531318 SBF1O95248 1867 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 TNNT2P45379 298 aaPredicted RBP10.24□□□□□ -0.77
NFRKB-208ENST00000531318 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 EYA1Q99502 592 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 CARD14Q9BXL6 1004 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 KIF24Q5T7B8 1368 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 WDR90Q96KV7 1748 aa10.24□□□□□ -0.77
NFRKB-208ENST00000531318 PXDNLA1KZ92 1463 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 PCNTO95613 3336 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 FCHSD2O94868 740 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 PHKG2P15735 406 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
NFRKB-208ENST00000531318 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 TRAPPC3LQ5T215 181 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 IFNL2Q8IZJ0 200 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
NFRKB-208ENST00000531318 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
NFRKB-208ENST00000531318 APLP1P51693 650 aa10.22□□□□□ -0.77
NFRKB-208ENST00000531318 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
NFRKB-208ENST00000531318 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
NFRKB-208ENST00000531318 DPEP1P16444 411 aa10.21□□□□□ -0.77
NFRKB-208ENST00000531318 RFC4P35249 363 aa10.21□□□□□ -0.77
NFRKB-208ENST00000531318 C16orf71Q8IYS4 520 aaPredicted RBP10.21□□□□□ -0.77
NFRKB-208ENST00000531318 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
NFRKB-208ENST00000531318 PARP3Q9Y6F1 533 aa10.21□□□□□ -0.77
NFRKB-208ENST00000531318 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.78
NFRKB-208ENST00000531318 NCAPD2Q15021 1401 aa10.21□□□□□ -0.78
NFRKB-208ENST00000531318 TOMM70O94826 608 aa10.2□□□□□ -0.78
NFRKB-208ENST00000531318 TGFB2P61812 414 aa10.2□□□□□ -0.78
NFRKB-208ENST00000531318 C10orf71Q711Q0 1435 aa10.2□□□□□ -0.78
NFRKB-208ENST00000531318 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
NFRKB-208ENST00000531318 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
NFRKB-208ENST00000531318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.2□□□□□ -0.784e-13■□□□□ 8.8
NFRKB-208ENST00000531318 AFDNP55196 1824 aaKnown RBP10.19□□□□□ -0.78
NFRKB-208ENST00000531318 ZNF831Q5JPB2 1677 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 ABCB7O75027 752 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 HTRA3P83110 453 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
NFRKB-208ENST00000531318 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 SLC4A9Q96Q91 983 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 POLKQ9UBT6 870 aa10.19□□□□□ -0.78
NFRKB-208ENST00000531318 KDRP35968 1356 aa10.18□□□□□ -0.78
NFRKB-208ENST00000531318 PTCD1O75127 700 aaKnown RBP10.18□□□□□ -0.78
NFRKB-208ENST00000531318 GYS1P13807 737 aa10.18□□□□□ -0.78
NFRKB-208ENST00000531318 CABP4P57796 275 aa10.18□□□□□ -0.78
NFRKB-208ENST00000531318 ZNF530Q6P9A1 599 aaPredicted RBP10.18□□□□□ -0.78
NFRKB-208ENST00000531318 SRP68Q9UHB9 627 aaKnown RBP10.18□□□□□ -0.78
NFRKB-208ENST00000531318 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
NFRKB-208ENST00000531318 KCPQ6ZWJ8 1503 aa10.17□□□□□ -0.78
NFRKB-208ENST00000531318 TJP1Q07157 1748 aa10.17□□□□□ -0.78
NFRKB-208ENST00000531318 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
NFRKB-208ENST00000531318 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
NFRKB-208ENST00000531318 TNRC6CQ9HCJ0 1690 aaKnown RBP10.17□□□□□ -0.78
NFRKB-208ENST00000531318 CACNA1SQ13698 1873 aa10.17□□□□□ -0.78
NFRKB-208ENST00000531318 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
NFRKB-208ENST00000531318 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
NFRKB-208ENST00000531318 HSP90AB1P08238 724 aaKnown RBP10.16□□□□□ -0.78
NFRKB-208ENST00000531318 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
NFRKB-208ENST00000531318 DNAJC5GQ8N7S2 189 aa10.16□□□□□ -0.78
NFRKB-208ENST00000531318 RNF181Q9P0P0 153 aa10.16□□□□□ -0.78
NFRKB-208ENST00000531318 PIM2Q9P1W9 311 aa10.16□□□□□ -0.78
NFRKB-208ENST00000531318 KDM6AO15550 1401 aaPredicted RBP10.16□□□□□ -0.78
NFRKB-208ENST00000531318 KCNA3P22001 575 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 CHRNA5P30532 468 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 CRKLP46109 303 aaKnown RBP10.15□□□□□ -0.78
NFRKB-208ENST00000531318 MTHFSP49914 203 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
NFRKB-208ENST00000531318 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
NFRKB-208ENST00000531318 DCAF5Q96JK2 942 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 RRAGCQ9HB90 399 aa10.15□□□□□ -0.78
NFRKB-208ENST00000531318 PLEKHG2Q9H7P9 1386 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms