RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 RTL5Q5HYW3 569 aaPredicted RBP6.5□□□□□ -1.37
CLNS1A-208ENST00000527265 WDR44Q5JSH3 913 aa6.5□□□□□ -1.37
CLNS1A-208ENST00000527265 LINC00114Q6XXX2 140 aa6.5□□□□□ -1.37
CLNS1A-208ENST00000527265 SEPT12Q8IYM1 358 aa6.5□□□□□ -1.37
CLNS1A-208ENST00000527265 TIMMDC1Q9NPL8 285 aa6.5□□□□□ -1.37
CLNS1A-208ENST00000527265 ARID3CA6NKF2 412 aa6.49□□□□□ -1.37
CLNS1A-208ENST00000527265 ITGB7P26010 798 aa6.49□□□□□ -1.37
CLNS1A-208ENST00000527265 GATA4P43694 442 aa6.49□□□□□ -1.37
CLNS1A-208ENST00000527265 NBPF10Q6P3W6 841 aaKnown RBP6.49□□□□□ -1.37
CLNS1A-208ENST00000527265 NBPF15Q8N660 670 aa6.49□□□□□ -1.37
CLNS1A-208ENST00000527265 BMP4P12644 408 aa6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 PPP2R2DQ66LE6 453 aa6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 SLCO4C1Q6ZQN7 724 aa6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
CLNS1A-208ENST00000527265 A0A1W2PRU2 124 aa6.47□□□□□ -1.37
CLNS1A-208ENST00000527265 CLK2P49760 499 aaKnown RBP6.47□□□□□ -1.37
CLNS1A-208ENST00000527265 CTDSPL2Q05D32 466 aa6.47□□□□□ -1.37
CLNS1A-208ENST00000527265 WASLO00401 505 aaPredicted RBP6.46□□□□□ -1.38
CLNS1A-208ENST00000527265 ARTNQ5T4W7 220 aa6.46□□□□□ -1.38
CLNS1A-208ENST00000527265 ESPNB1AK53 854 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 SPATA31C2B4DYI2 1134 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 APBB1O00213 710 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 CSB-PGBD3P0DP91 1061 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 LBRQ14739 615 aaKnown RBP6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 NR6A1Q15406 480 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 PGBD3Q8N328 593 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 GPAMQ9HCL2 828 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 GGA1Q9UJY5 639 aa6.45□□□□□ -1.38
CLNS1A-208ENST00000527265 DGKGP49619 791 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 CCDC125Q86Z20 511 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 LRRN4Q8WUT4 740 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 BTBD6Q96KE9 485 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 OCSTAMPQ9BR26 566 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 GRIP2Q9C0E4 1043 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 ESF1Q9H501 851 aaKnown RBP6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 GOLGA2P5Q9HBQ8 144 aa6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 ATXN7L1Q9ULK2 861 aaPredicted RBP6.44□□□□□ -1.38
CLNS1A-208ENST00000527265 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 CLN3Q13286 438 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 EFHC2Q5JST6 749 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 GOPCQ9HD26 462 aa6.43□□□□□ -1.38
CLNS1A-208ENST00000527265 A0A1B0GTH6 734 aa6.42□□□□□ -1.38
CLNS1A-208ENST00000527265 SPATA31C1P0DKV0 1188 aa6.42□□□□□ -1.38
CLNS1A-208ENST00000527265 EPXP11678 715 aa6.42□□□□□ -1.38
CLNS1A-208ENST00000527265 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
CLNS1A-208ENST00000527265 FGFR3P22607 806 aa6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 RSPO4Q2I0M5 234 aaPredicted RBP6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 SH3D19Q5HYK7 790 aa6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 RNF135Q8IUD6 432 aa6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 PCMTD1Q96MG8 357 aaPredicted RBP6.41□□□□□ -1.38
CLNS1A-208ENST00000527265 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
CLNS1A-208ENST00000527265 ARAFP10398 606 aa6.4□□□□□ -1.38
CLNS1A-208ENST00000527265 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 CHSY3Q70JA7 882 aa6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 CCDC82Q8N4S0 544 aa6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
CLNS1A-208ENST00000527265 NEURL1BA8MQ27 555 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 DYRK3O43781 588 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 APBA3O96018 575 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 ERVK-9P63128 1117 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 SKIV2LQ15477 1246 aaKnown RBP6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 PRRT3Q5FWE3 981 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 GNASQ5JWF2 1037 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 RNF20Q5VTR2 975 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
CLNS1A-208ENST00000527265 PHKA2P46019 1235 aa6.37□□□□□ -1.39
CLNS1A-208ENST00000527265 NKAPLQ5M9Q1 402 aa6.37□□□□□ -1.39
CLNS1A-208ENST00000527265 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
CLNS1A-208ENST00000527265 ATP1B4Q9UN42 357 aaPredicted RBP6.37□□□□□ -1.39
CLNS1A-208ENST00000527265 THBS1P07996 1170 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 ADH6P28332 368 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 FLIIQ13045 1269 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 LRP8Q14114 963 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 FIGNL1Q6PIW4 674 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 PROCA1Q8NCQ7 364 aaPredicted RBP6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 PLVAPQ9BX97 442 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
CLNS1A-208ENST00000527265 C2CD2LO14523 706 aa6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 COBLO75128 1261 aa6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 PRSS36Q5K4E3 855 aa6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 TMEM214Q6NUQ4 689 aaKnown RBP6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 PCDHB9Q9Y5E1 797 aa6.35□□□□□ -1.39
CLNS1A-208ENST00000527265 GIGYF1O75420 1035 aaPredicted RBP6.34□□□□□ -1.39
CLNS1A-208ENST00000527265 CTBSQ01459 385 aa6.34□□□□□ -1.39
CLNS1A-208ENST00000527265 NACC1Q96RE7 527 aa6.34□□□□□ -1.39
CLNS1A-208ENST00000527265 LOC105371045A0A1W2PR82 267 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 BNIP3LO60238 219 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 AP1G2O75843 785 aa6.33□□□□□ -1.4
CLNS1A-208ENST00000527265 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms