RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 GRIP2Q9C0E4 1043 aa10.5□□□□□ -0.73
C11orf54-203ENST00000526335 ESPNB1AK53 854 aa10.49□□□□□ -0.73
C11orf54-203ENST00000526335 NR6A1Q15406 480 aa10.49□□□□□ -0.73
C11orf54-203ENST00000526335 TAS1R3Q7RTX0 852 aa10.49□□□□□ -0.73
C11orf54-203ENST00000526335 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
C11orf54-203ENST00000526335 C2CD2LO14523 706 aa10.48□□□□□ -0.73
C11orf54-203ENST00000526335 EPXP11678 715 aa10.48□□□□□ -0.73
C11orf54-203ENST00000526335 SPATA31C2B4DYI2 1134 aa10.47□□□□□ -0.73
C11orf54-203ENST00000526335 WASLO00401 505 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-203ENST00000526335 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
C11orf54-203ENST00000526335 DYRK3O43781 588 aa10.46□□□□□ -0.74
C11orf54-203ENST00000526335 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
C11orf54-203ENST00000526335 RSPH6AQ9H0K4 717 aa10.45□□□□□ -0.74
C11orf54-203ENST00000526335 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
C11orf54-203ENST00000526335 RNF135Q8IUD6 432 aa10.44□□□□□ -0.74
C11orf54-203ENST00000526335 SEPT12Q8IYM1 358 aa10.43□□□□□ -0.74
C11orf54-203ENST00000526335 POLR3EQ9NVU0 708 aa10.43□□□□□ -0.74
C11orf54-203ENST00000526335 ATXN7L1Q9ULK2 861 aaPredicted RBP10.43□□□□□ -0.74
C11orf54-203ENST00000526335 CTBSQ01459 385 aa10.42□□□□□ -0.74
C11orf54-203ENST00000526335 PRSS36Q5K4E3 855 aa10.42□□□□□ -0.74
C11orf54-203ENST00000526335 NEURL1BA8MQ27 555 aa10.41□□□□□ -0.74
C11orf54-203ENST00000526335 SPATA31C1P0DKV0 1188 aa10.41□□□□□ -0.74
C11orf54-203ENST00000526335 CLN3Q13286 438 aa10.41□□□□□ -0.74
C11orf54-203ENST00000526335 CHSY3Q70JA7 882 aa10.41□□□□□ -0.74
C11orf54-203ENST00000526335 ABHD17AQ96GS6 310 aa10.41□□□□□ -0.74
C11orf54-203ENST00000526335 FGFR3P22607 806 aa10.4□□□□□ -0.74
C11orf54-203ENST00000526335 UBAP2LQ14157 1087 aaKnown RBP10.4□□□□□ -0.74
C11orf54-203ENST00000526335 PLVAPQ9BX97 442 aa10.4□□□□□ -0.74
C11orf54-203ENST00000526335 KRTAP4-7Q9BYR0 210 aa10.4□□□□□ -0.74
C11orf54-203ENST00000526335 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 PHKA2P46019 1235 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 COBLO75128 1261 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 LRP8Q14114 963 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 TRIM11Q96F44 468 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 RUBCNLQ9H714 662 aa10.39□□□□□ -0.75
C11orf54-203ENST00000526335 ARAFP10398 606 aa10.38□□□□□ -0.75
C11orf54-203ENST00000526335 A0A1B0GTH6 734 aa10.37□□□□□ -0.75
C11orf54-203ENST00000526335 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
C11orf54-203ENST00000526335 EFHC2Q5JST6 749 aa10.36□□□□□ -0.75
C11orf54-203ENST00000526335 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
C11orf54-203ENST00000526335 BNIP3LO60238 219 aa10.35□□□□□ -0.75
C11orf54-203ENST00000526335 CYP2U1Q7Z449 544 aa10.35□□□□□ -0.75
C11orf54-203ENST00000526335 ARHGEF10LQ9HCE6 1279 aa10.35□□□□□ -0.75
C11orf54-203ENST00000526335 HYAL3O43820 417 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-203ENST00000526335 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
C11orf54-203ENST00000526335 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
C11orf54-203ENST00000526335 GIGYF1O75420 1035 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-203ENST00000526335 APBA3O96018 575 aa10.33□□□□□ -0.76
C11orf54-203ENST00000526335 LCE1DQ5T752 114 aa10.33□□□□□ -0.76
C11orf54-203ENST00000526335 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-203ENST00000526335 NDFIP2Q9NV92 336 aa10.32□□□□□ -0.76
C11orf54-203ENST00000526335 SKIV2LQ15477 1246 aaKnown RBP10.31□□□□□ -0.76
C11orf54-203ENST00000526335 PRRT3Q5FWE3 981 aa10.3□□□□□ -0.76
C11orf54-203ENST00000526335 EPS8L1Q8TE68 723 aa10.3□□□□□ -0.76
C11orf54-203ENST00000526335 MSX1P28360 303 aa10.29□□□□□ -0.76
C11orf54-203ENST00000526335 SH3D19Q5HYK7 790 aa10.29□□□□□ -0.76
C11orf54-203ENST00000526335 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
C11orf54-203ENST00000526335 ADH6P28332 368 aa10.28□□□□□ -0.76
C11orf54-203ENST00000526335 CENPCQ03188 943 aa10.27□□□□□ -0.76
C11orf54-203ENST00000526335 MCTP1Q6DN14 999 aa10.27□□□□□ -0.76
C11orf54-203ENST00000526335 SPDYE3A6NKU9 549 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 SCTRP47872 440 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 DDRGK1Q96HY6 314 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 ZSCAN10Q96SZ4 725 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 AP1G2O75843 785 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 GPBP1L1Q9HC44 474 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-203ENST00000526335 KLF15Q9UIH9 416 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 PCDHB9Q9Y5E1 797 aa10.26□□□□□ -0.77
C11orf54-203ENST00000526335 YBX3P16989 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
C11orf54-203ENST00000526335 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
C11orf54-203ENST00000526335 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
C11orf54-203ENST00000526335 ESYT1Q9BSJ8 1104 aa10.25□□□□□ -0.77
C11orf54-203ENST00000526335 TMEM214Q6NUQ4 689 aaKnown RBP10.24□□□□□ -0.77
C11orf54-203ENST00000526335 FAM117AQ9C073 453 aa10.24□□□□□ -0.77
C11orf54-203ENST00000526335 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
C11orf54-203ENST00000526335 PAX4O43316 350 aa10.23□□□□□ -0.77
C11orf54-203ENST00000526335 TXKP42681 527 aa10.23□□□□□ -0.77
C11orf54-203ENST00000526335 C4orf17Q53FE4 359 aa10.23□□□□□ -0.77
C11orf54-203ENST00000526335 FIGNL1Q6PIW4 674 aa10.22□□□□□ -0.77
C11orf54-203ENST00000526335 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
C11orf54-203ENST00000526335 FAM229AH3BQW9 127 aa10.21□□□□□ -0.78
C11orf54-203ENST00000526335 TRAK2O60296 914 aa10.21□□□□□ -0.78
C11orf54-203ENST00000526335 IL2RAP01589 272 aa10.21□□□□□ -0.78
C11orf54-203ENST00000526335 RNF20Q5VTR2 975 aa10.21□□□□□ -0.78
C11orf54-203ENST00000526335 ARID1BQ8NFD5 2236 aaPredicted RBP10.2□□□□□ -0.78
C11orf54-203ENST00000526335 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
C11orf54-203ENST00000526335 H2AFB2P0C5Z0 115 aa10.2□□□□□ -0.78
C11orf54-203ENST00000526335 NACC1Q96RE7 527 aa10.2□□□□□ -0.78
C11orf54-203ENST00000526335 ZCCHC2Q9C0B9 1178 aaKnown RBP10.2□□□□□ -0.78
C11orf54-203ENST00000526335 CRISPLD1Q9H336 500 aa10.19□□□□□ -0.78
C11orf54-203ENST00000526335 HMX1Q9NP08 348 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms