RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 KNSTRNQ9Y448 316 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 LY75O60449 1722 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 C1QTNF8P60827 252 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
CAPN11-202ENST00000524554 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 GNPATO15228 680 aa13.12□□□□□ -0.31
CAPN11-202ENST00000524554 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
CAPN11-202ENST00000524554 IL13P35225 146 aa13.1□□□□□ -0.31
CAPN11-202ENST00000524554 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
CAPN11-202ENST00000524554 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
CAPN11-202ENST00000524554 COL24A1Q17RW2 1714 aa13.09□□□□□ -0.31
CAPN11-202ENST00000524554 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
CAPN11-202ENST00000524554 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
CAPN11-202ENST00000524554 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
CAPN11-202ENST00000524554 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
CAPN11-202ENST00000524554 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
CAPN11-202ENST00000524554 NPC1L1Q9UHC9 1359 aa13.09□□□□□ -0.31
CAPN11-202ENST00000524554 MTHFSP49914 203 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 CABP4P57796 275 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.31
CAPN11-202ENST00000524554 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.31
CAPN11-202ENST00000524554 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.31
CAPN11-202ENST00000524554 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.31
CAPN11-202ENST00000524554 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
CAPN11-202ENST00000524554 KIF20BQ96Q89 1820 aa13.08□□□□□ -0.32
CAPN11-202ENST00000524554 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
CAPN11-202ENST00000524554 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
CAPN11-202ENST00000524554 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
CAPN11-202ENST00000524554 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
CAPN11-202ENST00000524554 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
CAPN11-202ENST00000524554 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
CAPN11-202ENST00000524554 MMP10P09238 476 aa13.07□□□□□ -0.32
CAPN11-202ENST00000524554 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
CAPN11-202ENST00000524554 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
CAPN11-202ENST00000524554 PKD1L3Q7Z443 1732 aa13.06□□□□□ -0.32
CAPN11-202ENST00000524554 KDRP35968 1356 aa13.06□□□□□ -0.32
CAPN11-202ENST00000524554 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
CAPN11-202ENST00000524554 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
CAPN11-202ENST00000524554 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
CAPN11-202ENST00000524554 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
CAPN11-202ENST00000524554 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
CAPN11-202ENST00000524554 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
CAPN11-202ENST00000524554 GYS1P13807 737 aa13.04□□□□□ -0.32
CAPN11-202ENST00000524554 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
CAPN11-202ENST00000524554 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
CAPN11-202ENST00000524554 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
CAPN11-202ENST00000524554 RFC4P35249 363 aa13.03□□□□□ -0.32
CAPN11-202ENST00000524554 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
CAPN11-202ENST00000524554 C5P01031 1676 aa13.03□□□□□ -0.32
CAPN11-202ENST00000524554 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
CAPN11-202ENST00000524554 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
CAPN11-202ENST00000524554 ADRA2BP18089 450 aa13.03□□□□□ -0.32
CAPN11-202ENST00000524554 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
CAPN11-202ENST00000524554 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
CAPN11-202ENST00000524554 TGFB2P61812 414 aa13.02□□□□□ -0.33
CAPN11-202ENST00000524554 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
CAPN11-202ENST00000524554 ITGB4P16144 1822 aa13.01□□□□□ -0.33
CAPN11-202ENST00000524554 HMOX1P09601 288 aa13.01□□□□□ -0.33
CAPN11-202ENST00000524554 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
CAPN11-202ENST00000524554 ATP10DQ9P241 1426 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
CAPN11-202ENST00000524554 DPEP1P16444 411 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 KCNA3P22001 575 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 SLC39A6Q13433 755 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 FKBP8Q14318 412 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 MTHFSDQ2M296 383 aaKnown RBP13□□□□□ -0.33
CAPN11-202ENST00000524554 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
CAPN11-202ENST00000524554 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
CAPN11-202ENST00000524554 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
CAPN11-202ENST00000524554 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
CAPN11-202ENST00000524554 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
CAPN11-202ENST00000524554 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
CAPN11-202ENST00000524554 TM4SF1P30408 202 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 ADCY9O60503 1353 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
CAPN11-202ENST00000524554 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 CCDC87Q9NVE4 849 aa12.98□□□□□ -0.33
CAPN11-202ENST00000524554 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
CAPN11-202ENST00000524554 DDR1Q08345 913 aa12.97□□□□□ -0.33
CAPN11-202ENST00000524554 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
CAPN11-202ENST00000524554 CHD4Q14839 1912 aa12.96□□□□□ -0.33
CAPN11-202ENST00000524554 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
CAPN11-202ENST00000524554 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.33
CAPN11-202ENST00000524554 FCHSD2O94868 740 aa12.95□□□□□ -0.34
CAPN11-202ENST00000524554 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
CAPN11-202ENST00000524554 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
CAPN11-202ENST00000524554 KIF3CO14782 793 aa12.94□□□□□ -0.34
CAPN11-202ENST00000524554 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
CAPN11-202ENST00000524554 C10orf71Q711Q0 1435 aa12.94□□□□□ -0.34
CAPN11-202ENST00000524554 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
CAPN11-202ENST00000524554 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms