RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
CTNNA1-235ENST00000522730 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
CTNNA1-235ENST00000522730 AMIGO3Q86WK7 504 aa13.91□□□□□ -0.18
CTNNA1-235ENST00000522730 UTRNP46939 3433 aa13.91□□□□□ -0.18
CTNNA1-235ENST00000522730 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 GNPATO15228 680 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 IL13P35225 146 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 ITPK1Q13572 414 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
CTNNA1-235ENST00000522730 HMOX1P09601 288 aa13.89□□□□□ -0.19
CTNNA1-235ENST00000522730 ITGB4P16144 1822 aa13.88□□□□□ -0.19
CTNNA1-235ENST00000522730 ANKRD26Q9UPS8 1709 aa13.88□□□□□ -0.19
CTNNA1-235ENST00000522730 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
CTNNA1-235ENST00000522730 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
CTNNA1-235ENST00000522730 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
CTNNA1-235ENST00000522730 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
CTNNA1-235ENST00000522730 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
CTNNA1-235ENST00000522730 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
CTNNA1-235ENST00000522730 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
CTNNA1-235ENST00000522730 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
CTNNA1-235ENST00000522730 WWC3Q9ULE0 1092 aa13.86□□□□□ -0.19
CTNNA1-235ENST00000522730 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 SSFA2P28290 1259 aa13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 C5P01031 1676 aa13.85□□□□□ -0.19
CTNNA1-235ENST00000522730 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
CTNNA1-235ENST00000522730 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
CTNNA1-235ENST00000522730 LGR6Q9HBX8 967 aa13.84□□□□□ -0.19
CTNNA1-235ENST00000522730 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
CTNNA1-235ENST00000522730 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
CTNNA1-235ENST00000522730 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTNNA1-235ENST00000522730 CD2APQ9Y5K6 639 aa13.83□□□□□ -0.2
CTNNA1-235ENST00000522730 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-235ENST00000522730 RFC4P35249 363 aa13.82□□□□□ -0.2
CTNNA1-235ENST00000522730 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
CTNNA1-235ENST00000522730 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
CTNNA1-235ENST00000522730 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
CTNNA1-235ENST00000522730 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
CTNNA1-235ENST00000522730 MMP10P09238 476 aa13.81□□□□□ -0.2
CTNNA1-235ENST00000522730 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-235ENST00000522730 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
CTNNA1-235ENST00000522730 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
CTNNA1-235ENST00000522730 RNMTO43148 476 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-235ENST00000522730 RC3H1Q5TC82 1133 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-235ENST00000522730 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
CTNNA1-235ENST00000522730 KDRP35968 1356 aa13.79□□□□□ -0.2
CTNNA1-235ENST00000522730 PLEKHG2Q9H7P9 1386 aa13.79□□□□□ -0.2
CTNNA1-235ENST00000522730 CRKLP46109 303 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-235ENST00000522730 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
CTNNA1-235ENST00000522730 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
CTNNA1-235ENST00000522730 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
CTNNA1-235ENST00000522730 A0A0G2JLW4 131 aa13.75□□□□□ -0.21
CTNNA1-235ENST00000522730 GYS1P13807 737 aa13.75□□□□□ -0.21
CTNNA1-235ENST00000522730 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-235ENST00000522730 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
CTNNA1-235ENST00000522730 CHD4Q14839 1912 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 GNAT3A8MTJ3 354 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 ZPR1O75312 459 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 TEFQ10587 303 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 FKBP8Q14318 412 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-235ENST00000522730 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 U2AF1L5P0DN76 240 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 U2AF1Q01081 240 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 PHACTR3Q96KR7 559 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 NUDCQ9Y266 331 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 BCS1LQ9Y276 419 aa13.72□□□□□ -0.21
CTNNA1-235ENST00000522730 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-235ENST00000522730 DPEP1P16444 411 aa13.71□□□□□ -0.21
CTNNA1-235ENST00000522730 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
CTNNA1-235ENST00000522730 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-235ENST00000522730 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
CTNNA1-235ENST00000522730 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-235ENST00000522730 FCHSD2O94868 740 aa13.69□□□□□ -0.22
CTNNA1-235ENST00000522730 C1QTNF8P60827 252 aa13.69□□□□□ -0.22
CTNNA1-235ENST00000522730 TGFB2P61812 414 aa13.69□□□□□ -0.22
CTNNA1-235ENST00000522730 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-235ENST00000522730 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 STARD3NLO95772 234 aa13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 DDR1Q08345 913 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms