RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ARHGEF10LQ9HCE6 1279 aa7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 NOP53Q9NZM5 478 aaKnown RBP7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 USP17L8P0C7I0 530 aa7.66□□□□□ -1.18
ATP6V1C1-204ENST00000518959 PHKA2P46019 1235 aa7.66□□□□□ -1.18
ATP6V1C1-204ENST00000518959 DOC2BQ14184 412 aa7.66□□□□□ -1.18
ATP6V1C1-204ENST00000518959 RNF20Q5VTR2 975 aa7.66□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
ATP6V1C1-204ENST00000518959 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GTF2E1P29083 439 aaPredicted RBP7.65□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CHRNA4P43681 627 aa7.65□□□□□ -1.18
ATP6V1C1-204ENST00000518959 A0A1B0GTH6 734 aa7.64□□□□□ -1.19
ATP6V1C1-204ENST00000518959 THBS1P07996 1170 aa7.64□□□□□ -1.19
ATP6V1C1-204ENST00000518959 SLCO4C1Q6ZQN7 724 aa7.64□□□□□ -1.19
ATP6V1C1-204ENST00000518959 SLC24A3Q9HC58 644 aa7.64□□□□□ -1.19
ATP6V1C1-204ENST00000518959 RAB6BQ9NRW1 208 aa7.64□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ZBBXA8MT70 800 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 SH3D19Q5HYK7 790 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 EFHC2Q5JST6 749 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 KRTAP1-3Q8IUG1 177 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 BTBD6Q96KE9 485 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 RUBCNLQ9H714 662 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ATXN7L1Q9ULK2 861 aaPredicted RBP7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 PCDHB11Q9Y5F2 797 aa7.63□□□□□ -1.19
ATP6V1C1-204ENST00000518959 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 FGFR3P22607 806 aa7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 SCTRP47872 440 aa7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 GNASQ5JWF2 1037 aa7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ABHD17AQ96GS6 310 aa7.62□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ITGB7P26010 798 aa7.61□□□□□ -1.19
ATP6V1C1-204ENST00000518959 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
ATP6V1C1-204ENST00000518959 CNKSR1Q969H4 720 aa7.61□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
ATP6V1C1-204ENST00000518959 C2CD2LO14523 706 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 EPXP11678 715 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 GATA4P43694 442 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 CTBSQ01459 385 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 CENPCQ03188 943 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 ESYT1Q9BSJ8 1104 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
ATP6V1C1-204ENST00000518959 NEURL1BA8MQ27 555 aa7.59□□□□□ -1.19
ATP6V1C1-204ENST00000518959 GNRH1P01148 92 aa7.59□□□□□ -1.19
ATP6V1C1-204ENST00000518959 FBXO45P0C2W1 286 aa7.59□□□□□ -1.19
ATP6V1C1-204ENST00000518959 DGKGP49619 791 aa7.59□□□□□ -1.19
ATP6V1C1-204ENST00000518959 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
ATP6V1C1-204ENST00000518959 TRAK2O60296 914 aa7.58□□□□□ -1.2
ATP6V1C1-204ENST00000518959 MSX1P28360 303 aa7.58□□□□□ -1.2
ATP6V1C1-204ENST00000518959 BNIP3LO60238 219 aa7.57□□□□□ -1.2
ATP6V1C1-204ENST00000518959 IL2RAP01589 272 aa7.57□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ARAFP10398 606 aa7.57□□□□□ -1.2
ATP6V1C1-204ENST00000518959 UBAP2LQ14157 1087 aaKnown RBP7.57□□□□□ -1.2
ATP6V1C1-204ENST00000518959 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
ATP6V1C1-204ENST00000518959 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
ATP6V1C1-204ENST00000518959 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
ATP6V1C1-204ENST00000518959 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
ATP6V1C1-204ENST00000518959 MYCP01106 439 aaPredicted RBP7.55□□□□□ -1.2
ATP6V1C1-204ENST00000518959 LCE3BQ5TA77 95 aa7.55□□□□□ -1.2
ATP6V1C1-204ENST00000518959 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
ATP6V1C1-204ENST00000518959 RFC5P40937 340 aa7.54□□□□□ -1.2
ATP6V1C1-204ENST00000518959 FIGNL1Q6PIW4 674 aa7.54□□□□□ -1.2
ATP6V1C1-204ENST00000518959 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
ATP6V1C1-204ENST00000518959 NDFIP2Q9NV92 336 aa7.54□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
ATP6V1C1-204ENST00000518959 SPATA31C1P0DKV0 1188 aa7.53□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ADH6P28332 368 aa7.53□□□□□ -1.2
ATP6V1C1-204ENST00000518959 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ZFP64Q9NPA5 681 aa7.53□□□□□ -1.2
ATP6V1C1-204ENST00000518959 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
ATP6V1C1-204ENST00000518959 XAGE2Q96GT9 111 aa7.52□□□□□ -1.21
ATP6V1C1-204ENST00000518959 FAM117AQ9C073 453 aa7.52□□□□□ -1.21
ATP6V1C1-204ENST00000518959 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
ATP6V1C1-204ENST00000518959 RSPO4Q2I0M5 234 aaPredicted RBP7.51□□□□□ -1.21
ATP6V1C1-204ENST00000518959 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
ATP6V1C1-204ENST00000518959 ZCCHC2Q9C0B9 1178 aaKnown RBP7.51□□□□□ -1.21
ATP6V1C1-204ENST00000518959 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
ATP6V1C1-204ENST00000518959 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
ATP6V1C1-204ENST00000518959 NR1H3Q13133 447 aa7.5□□□□□ -1.21
ATP6V1C1-204ENST00000518959 RHBDD1Q8TEB9 315 aa7.5□□□□□ -1.21
ATP6V1C1-204ENST00000518959 TRIM11Q96F44 468 aa7.5□□□□□ -1.21
ATP6V1C1-204ENST00000518959 KDM4CQ9H3R0 1056 aa7.5□□□□□ -1.21
ATP6V1C1-204ENST00000518959 HRH3Q9Y5N1 445 aa7.5□□□□□ -1.21
ATP6V1C1-204ENST00000518959 SPDYE3A6NKU9 549 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 APBA3O96018 575 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 PLA2G4AP47712 749 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 FOXD4L6Q3SYB3 417 aaPredicted RBP7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 TMEM259Q4ZIN3 620 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 PRRT3Q5FWE3 981 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 ARTNQ5T4W7 220 aa7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 FOXD4L3Q6VB84 417 aaPredicted RBP7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 GPBP1L1Q9HC44 474 aaPredicted RBP7.49□□□□□ -1.21
ATP6V1C1-204ENST00000518959 DCDC2BA2VCK2 349 aa7.48□□□□□ -1.21
ATP6V1C1-204ENST00000518959 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
ATP6V1C1-204ENST00000518959 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
ATP6V1C1-204ENST00000518959 PRR12Q9ULL5 1215 aa7.48□□□□□ -1.21
ATP6V1C1-204ENST00000518959 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
ATP6V1C1-204ENST00000518959 CD33P20138 364 aa7.47□□□□□ -1.21
ATP6V1C1-204ENST00000518959 PCBP4P57723 403 aaKnown RBP7.47□□□□□ -1.21
ATP6V1C1-204ENST00000518959 TLR1Q15399 786 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms