RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 C5P01031 1676 aa12.47□□□□□ -0.41
PVT1-207ENST00000518528 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
PVT1-207ENST00000518528 FLT4P35916 1363 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 FYB1O15117 783 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 HTRA3P83110 453 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
PVT1-207ENST00000518528 RFC4P35249 363 aa12.45□□□□□ -0.42
PVT1-207ENST00000518528 ITPK1Q13572 414 aa12.45□□□□□ -0.42
PVT1-207ENST00000518528 DALRD3Q5D0E6 543 aaKnown RBP12.45□□□□□ -0.42
PVT1-207ENST00000518528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■□□□□ 11.1
PVT1-207ENST00000518528 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
PVT1-207ENST00000518528 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
PVT1-207ENST00000518528 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
PVT1-207ENST00000518528 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
PVT1-207ENST00000518528 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
PVT1-207ENST00000518528 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
PVT1-207ENST00000518528 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
PVT1-207ENST00000518528 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
PVT1-207ENST00000518528 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
PVT1-207ENST00000518528 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
PVT1-207ENST00000518528 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
PVT1-207ENST00000518528 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
PVT1-207ENST00000518528 GYS1P13807 737 aa12.41□□□□□ -0.42
PVT1-207ENST00000518528 TESK2Q96S53 571 aa12.41□□□□□ -0.42
PVT1-207ENST00000518528 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
PVT1-207ENST00000518528 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.42
PVT1-207ENST00000518528 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
PVT1-207ENST00000518528 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
PVT1-207ENST00000518528 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
PVT1-207ENST00000518528 PHKG2P15735 406 aa12.4□□□□□ -0.42
PVT1-207ENST00000518528 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
PVT1-207ENST00000518528 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
PVT1-207ENST00000518528 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
PVT1-207ENST00000518528 KCNA3P22001 575 aa12.39□□□□□ -0.43
PVT1-207ENST00000518528 KCPQ6ZWJ8 1503 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
PVT1-207ENST00000518528 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
PVT1-207ENST00000518528 EYA1Q99502 592 aa12.37□□□□□ -0.43
PVT1-207ENST00000518528 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
PVT1-207ENST00000518528 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
PVT1-207ENST00000518528 LMNB1P20700 586 aa12.36□□□□□ -0.43
PVT1-207ENST00000518528 KDRP35968 1356 aa12.35□□□□□ -0.43
PVT1-207ENST00000518528 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
PVT1-207ENST00000518528 CABP4P57796 275 aa12.35□□□□□ -0.43
PVT1-207ENST00000518528 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
PVT1-207ENST00000518528 NCAPD2Q15021 1401 aa12.35□□□□□ -0.43
PVT1-207ENST00000518528 ZPR1O75312 459 aa12.34□□□□□ -0.43
PVT1-207ENST00000518528 CHRNA5P30532 468 aa12.34□□□□□ -0.43
PVT1-207ENST00000518528 FKBP8Q14318 412 aa12.34□□□□□ -0.43
PVT1-207ENST00000518528 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
PVT1-207ENST00000518528 SLC4A9Q96Q91 983 aa12.34□□□□□ -0.43
PVT1-207ENST00000518528 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
PVT1-207ENST00000518528 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
PVT1-207ENST00000518528 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
PVT1-207ENST00000518528 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
PVT1-207ENST00000518528 DDR1Q08345 913 aa12.32□□□□□ -0.44
PVT1-207ENST00000518528 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
PVT1-207ENST00000518528 SRP68Q9UHB9 627 aaKnown RBP12.32□□□□□ -0.44
PVT1-207ENST00000518528 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
PVT1-207ENST00000518528 RASSF7Q02833 373 aa12.31□□□□□ -0.44
PVT1-207ENST00000518528 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
PVT1-207ENST00000518528 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
PVT1-207ENST00000518528 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
PVT1-207ENST00000518528 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
PVT1-207ENST00000518528 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
PVT1-207ENST00000518528 POLRMTO00411 1230 aaKnown RBP12.3□□□□□ -0.44
PVT1-207ENST00000518528 MTHFSP49914 203 aa12.3□□□□□ -0.44
PVT1-207ENST00000518528 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
PVT1-207ENST00000518528 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
PVT1-207ENST00000518528 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
PVT1-207ENST00000518528 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
PVT1-207ENST00000518528 ITGB4P16144 1822 aa12.3□□□□□ -0.44
PVT1-207ENST00000518528 TM4SF1P30408 202 aa12.29□□□□□ -0.44
PVT1-207ENST00000518528 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
PVT1-207ENST00000518528 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
PVT1-207ENST00000518528 H0YIN7 160 aa12.28□□□□□ -0.44
PVT1-207ENST00000518528 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
PVT1-207ENST00000518528 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
PVT1-207ENST00000518528 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
PVT1-207ENST00000518528 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
PVT1-207ENST00000518528 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
PVT1-207ENST00000518528 TNRC6CQ9HCJ0 1690 aaKnown RBP12.27□□□□□ -0.45
PVT1-207ENST00000518528 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
PVT1-207ENST00000518528 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.45
PVT1-207ENST00000518528 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
PVT1-207ENST00000518528 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
PVT1-207ENST00000518528 SLC34A2O95436 690 aa12.26□□□□□ -0.45
PVT1-207ENST00000518528 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
PVT1-207ENST00000518528 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
PVT1-207ENST00000518528 SERPINB2P05120 415 aa12.25□□□□□ -0.45
PVT1-207ENST00000518528 NFIXQ14938 502 aa12.25□□□□□ -0.45
PVT1-207ENST00000518528 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
PVT1-207ENST00000518528 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms