RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 WASLO00401 505 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-218ENST00000513341 GNB5O14775 395 aa7.46□□□□□ -1.22
PDLIM5-218ENST00000513341 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
PDLIM5-218ENST00000513341 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 ITGB7P26010 798 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 UBAP2LQ14157 1087 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 SH3D19Q5HYK7 790 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 FBXO31Q5XUX0 539 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 CD163Q86VB7 1156 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 EPS8L1Q8TE68 723 aa7.45□□□□□ -1.22
PDLIM5-218ENST00000513341 GRIN2CQ14957 1233 aa7.44□□□□□ -1.22
PDLIM5-218ENST00000513341 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
PDLIM5-218ENST00000513341 RRAGCQ9HB90 399 aa7.44□□□□□ -1.22
PDLIM5-218ENST00000513341 NOP53Q9NZM5 478 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-218ENST00000513341 TRAK2O60296 914 aa7.43□□□□□ -1.22
PDLIM5-218ENST00000513341 GIGYF1O75420 1035 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-218ENST00000513341 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
PDLIM5-218ENST00000513341 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-218ENST00000513341 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
PDLIM5-218ENST00000513341 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-218ENST00000513341 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-218ENST00000513341 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
PDLIM5-218ENST00000513341 NESP48681 1621 aa7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 AP1G2O75843 785 aa7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 DGKGP49619 791 aa7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 HMGXB3Q12766 1538 aa7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 THOC2Q8NI27 1593 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-218ENST00000513341 ZBBXA8MT70 800 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 USP17L8P0C7I0 530 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 EPXP11678 715 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 ZNF592Q92610 1267 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 BTBD6Q96KE9 485 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 KRTAP4-12Q9BQ66 201 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 SMARCA2P51531 1590 aa7.4□□□□□ -1.22
PDLIM5-218ENST00000513341 LAMC3Q9Y6N6 1575 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 GNRH1P01148 92 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 CHRNA4P43681 627 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 OSBPL3Q9H4L5 887 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 HRH3Q9Y5N1 445 aa7.39□□□□□ -1.23
PDLIM5-218ENST00000513341 PDS5BQ9NTI5 1447 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 C2CD2LO14523 706 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 ARAFP10398 606 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 BMP4P12644 408 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 AMPD1P23109 780 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 ZMYM1Q5SVZ6 1142 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 PROCA1Q8NCQ7 364 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 GGA1Q9UJY5 639 aa7.38□□□□□ -1.23
PDLIM5-218ENST00000513341 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
PDLIM5-218ENST00000513341 ARHGEF10LQ9HCE6 1279 aa7.37□□□□□ -1.23
PDLIM5-218ENST00000513341 CSB-PGBD3P0DP91 1061 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 FGFR3P22607 806 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 SCTRP47872 440 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 CENPCQ03188 943 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 PGBD3Q8N328 593 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
PDLIM5-218ENST00000513341 CNKSR1Q969H4 720 aa7.35□□□□□ -1.23
PDLIM5-218ENST00000513341 CRISPLD1Q9H336 500 aa7.35□□□□□ -1.23
PDLIM5-218ENST00000513341 GPAMQ9HCL2 828 aa7.35□□□□□ -1.23
PDLIM5-218ENST00000513341 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-218ENST00000513341 IL2RAP01589 272 aa7.34□□□□□ -1.23
PDLIM5-218ENST00000513341 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
PDLIM5-218ENST00000513341 DDRGK1Q96HY6 314 aa7.34□□□□□ -1.23
PDLIM5-218ENST00000513341 ZSCAN10Q96SZ4 725 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-218ENST00000513341 FHDC1Q9C0D6 1143 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-218ENST00000513341 BNIP3LO60238 219 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 FBXO45P0C2W1 286 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 GATA4P43694 442 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 CTBSQ01459 385 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 DOC2BQ14184 412 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 GNASQ5JWF2 1037 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 ABHD17AQ96GS6 310 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 SLC24A3Q9HC58 644 aa7.33□□□□□ -1.24
PDLIM5-218ENST00000513341 BAZ1BQ9UIG0 1483 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 MSX1P28360 303 aa7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 FIGNL1Q6PIW4 674 aa7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 KIF21AQ7Z4S6 1674 aa7.32□□□□□ -1.24
PDLIM5-218ENST00000513341 SMARCA4P51532 1647 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 SPATA31C1P0DKV0 1188 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 GTF2E1P29083 439 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 RFC5P40937 340 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 C4orf17Q53FE4 359 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 NKAPLQ5M9Q1 402 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 ESF1Q9H501 851 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 PCDHB11Q9Y5F2 797 aa7.31□□□□□ -1.24
PDLIM5-218ENST00000513341 PHKA2P46019 1235 aa7.3□□□□□ -1.24
PDLIM5-218ENST00000513341 ARTNQ5T4W7 220 aa7.3□□□□□ -1.24
PDLIM5-218ENST00000513341 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
PDLIM5-218ENST00000513341 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
PDLIM5-218ENST00000513341 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms