RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 TRMT44Q8IYL2 757 aaKnown RBP10.95□□□□□ -0.66
RFC1-213ENST00000512275 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
RFC1-213ENST00000512275 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 ARHGAP35Q9NRY4 1499 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 POTECB2RU33 542 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 SSFA2P28290 1259 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 SH3BP2P78314 561 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
RFC1-213ENST00000512275 TXNDC2Q86VQ3 553 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 SIX5Q8N196 739 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 AAASQ9NRG9 546 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
RFC1-213ENST00000512275 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 DPYDQ12882 1025 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 AGERQ15109 404 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 DNAAF2Q9NVR5 837 aaKnown RBP10.93□□□□□ -0.66
RFC1-213ENST00000512275 MTMR7Q9Y216 660 aa10.93□□□□□ -0.66
RFC1-213ENST00000512275 ZBTB7BO15156 539 aaPredicted RBP10.92□□□□□ -0.66
RFC1-213ENST00000512275 TRIM32Q13049 653 aa10.92□□□□□ -0.66
RFC1-213ENST00000512275 SWI5Q1ZZU3 235 aa10.92□□□□□ -0.66
RFC1-213ENST00000512275 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
RFC1-213ENST00000512275 RNF20Q5VTR2 975 aa10.92□□□□□ -0.66
RFC1-213ENST00000512275 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
RFC1-213ENST00000512275 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
RFC1-213ENST00000512275 UGGT2Q9NYU1 1516 aa10.91□□□□□ -0.66
RFC1-213ENST00000512275 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
RFC1-213ENST00000512275 CDV3Q9UKY7 258 aaKnown RBP10.91□□□□□ -0.66
RFC1-213ENST00000512275 GTF2IP78347 998 aa10.9□□□□□ -0.66
RFC1-213ENST00000512275 OXLD1Q5BKU9 147 aa10.9□□□□□ -0.66
RFC1-213ENST00000512275 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
RFC1-213ENST00000512275 KIAA0556O60303 1618 aa10.9□□□□□ -0.66
RFC1-213ENST00000512275 SHROOM2Q13796 1616 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 WNT7AO00755 349 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 AVPP01185 164 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 PCDHGA11Q9Y5H2 935 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
RFC1-213ENST00000512275 CCER1Q8TC90 406 aaPredicted RBP10.88□□□□□ -0.67
RFC1-213ENST00000512275 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
RFC1-213ENST00000512275 DISP1Q96F81 1524 aa10.87□□□□□ -0.67
RFC1-213ENST00000512275 PCF11O94913 1555 aaKnown RBP10.86□□□□□ -0.67
RFC1-213ENST00000512275 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 CCDC27Q2M243 656 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 MAP4K5Q9Y4K4 846 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
RFC1-213ENST00000512275 ARID4AP29374 1257 aaPredicted RBP10.85□□□□□ -0.67
RFC1-213ENST00000512275 WNT7BP56706 349 aa10.85□□□□□ -0.67
RFC1-213ENST00000512275 SKOR1P84550 965 aa10.85□□□□□ -0.67
RFC1-213ENST00000512275 C1orf216Q8TAB5 229 aa10.85□□□□□ -0.67
RFC1-213ENST00000512275 MRGPRX2Q96LB1 330 aa10.85□□□□□ -0.67
RFC1-213ENST00000512275 AXIN1O15169 862 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 SEC13P55735 322 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 USP4Q13107 963 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
RFC1-213ENST00000512275 SIRT1Q96EB6 747 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 ERCC6L2Q5T890 1561 aa10.84□□□□□ -0.67
RFC1-213ENST00000512275 SMPD1P17405 629 aa10.83□□□□□ -0.68
RFC1-213ENST00000512275 VARSP26640 1264 aaKnown RBP10.83□□□□□ -0.68
RFC1-213ENST00000512275 OCLNQ16625 522 aa10.83□□□□□ -0.68
RFC1-213ENST00000512275 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
RFC1-213ENST00000512275 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
RFC1-213ENST00000512275 TPCN2Q8NHX9 752 aa10.83□□□□□ -0.68
RFC1-213ENST00000512275 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
RFC1-213ENST00000512275 KCTD15Q96SI1 283 aaPredicted RBP10.83□□□□□ -0.68
RFC1-213ENST00000512275 LRRIQ1Q96JM4 1722 aa10.82□□□□□ -0.68
RFC1-213ENST00000512275 SMCPP49901 116 aaPredicted RBP10.82□□□□□ -0.68
RFC1-213ENST00000512275 PRG4Q92954 1404 aaPredicted RBP10.82□□□□□ -0.68
RFC1-213ENST00000512275 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
RFC1-213ENST00000512275 CARMIL2Q6F5E8 1435 aa10.81□□□□□ -0.68
RFC1-213ENST00000512275 TTBK1Q5TCY1 1321 aaPredicted RBP10.81□□□□□ -0.68
RFC1-213ENST00000512275 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
RFC1-213ENST00000512275 J3QL48 77 aa10.8□□□□□ -0.68
RFC1-213ENST00000512275 RC3H1Q5TC82 1133 aaKnown RBP10.8□□□□□ -0.68
RFC1-213ENST00000512275 TAS1R3Q7RTX0 852 aa10.8□□□□□ -0.68
RFC1-213ENST00000512275 CFAP43Q8NDM7 1665 aa10.79□□□□□ -0.68
RFC1-213ENST00000512275 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
RFC1-213ENST00000512275 CXXC1Q9P0U4 656 aaPredicted RBP10.79□□□□□ -0.68
RFC1-213ENST00000512275 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 SOWAHDA6NJG2 315 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 M0R2N6 131 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 ERVH48-1M5A8F1 160 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 SCNN1AP37088 669 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 SCTRP47872 440 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 PSME1Q06323 249 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 GMPR2Q9P2T1 348 aaKnown RBP10.78□□□□□ -0.68
RFC1-213ENST00000512275 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
RFC1-213ENST00000512275 HECW1Q76N89 1606 aa10.77□□□□□ -0.68
RFC1-213ENST00000512275 PRMT3O60678 531 aa10.77□□□□□ -0.69
RFC1-213ENST00000512275 SERPINB4P48594 390 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms