RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 ALYREFQ86V81 257 aaKnown RBP8.72□□□□□ -1.01
MSH3-202ENST00000512258 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
MSH3-202ENST00000512258 NUCKS1Q9H1E3 243 aaKnown RBP8.72□□□□□ -1.01
MSH3-202ENST00000512258 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
MSH3-202ENST00000512258 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
MSH3-202ENST00000512258 THOC2Q8NI27 1593 aaKnown RBP8.72□□□□□ -1.01
MSH3-202ENST00000512258 MRC2Q9UBG0 1479 aa8.71□□□□□ -1.01
MSH3-202ENST00000512258 CUX1P39880 1505 aa8.71□□□□□ -1.01
MSH3-202ENST00000512258 UBAP2LQ14157 1087 aaKnown RBP8.71□□□□□ -1.02
MSH3-202ENST00000512258 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
MSH3-202ENST00000512258 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
MSH3-202ENST00000512258 SYNJ1O43426 1573 aa8.7□□□□□ -1.02
MSH3-202ENST00000512258 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
MSH3-202ENST00000512258 ERVK-9P63128 1117 aa8.7□□□□□ -1.02
MSH3-202ENST00000512258 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
MSH3-202ENST00000512258 KRTAP1-3Q8IUG1 177 aa8.7□□□□□ -1.02
MSH3-202ENST00000512258 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
MSH3-202ENST00000512258 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
MSH3-202ENST00000512258 F11P03951 625 aa8.69□□□□□ -1.02
MSH3-202ENST00000512258 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
MSH3-202ENST00000512258 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
MSH3-202ENST00000512258 AP1G2O75843 785 aa8.68□□□□□ -1.02
MSH3-202ENST00000512258 CLN3Q13286 438 aa8.68□□□□□ -1.02
MSH3-202ENST00000512258 WDR62O43379 1518 aa8.68□□□□□ -1.02
MSH3-202ENST00000512258 DNMBPQ6XZF7 1577 aa8.68□□□□□ -1.02
MSH3-202ENST00000512258 C1QTNF9BB2RNN3 333 aa8.67□□□□□ -1.02
MSH3-202ENST00000512258 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
MSH3-202ENST00000512258 EDARADDQ8WWZ3 215 aa8.67□□□□□ -1.02
MSH3-202ENST00000512258 TIMMDC1Q9NPL8 285 aa8.67□□□□□ -1.02
MSH3-202ENST00000512258 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
MSH3-202ENST00000512258 SCTRP47872 440 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 GRIN2CQ14957 1233 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
MSH3-202ENST00000512258 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
MSH3-202ENST00000512258 C2CD2LO14523 706 aa8.65□□□□□ -1.02
MSH3-202ENST00000512258 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
MSH3-202ENST00000512258 NLRP3Q96P20 1036 aa8.65□□□□□ -1.02
MSH3-202ENST00000512258 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
MSH3-202ENST00000512258 GDF2Q9UK05 429 aaPredicted RBP8.65□□□□□ -1.02
MSH3-202ENST00000512258 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.03
MSH3-202ENST00000512258 FGD5Q6ZNL6 1462 aa8.64□□□□□ -1.03
MSH3-202ENST00000512258 TRAK2O60296 914 aa8.64□□□□□ -1.03
MSH3-202ENST00000512258 CHRNA4P43681 627 aa8.64□□□□□ -1.03
MSH3-202ENST00000512258 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
MSH3-202ENST00000512258 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
MSH3-202ENST00000512258 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
MSH3-202ENST00000512258 CUX2O14529 1486 aa8.63□□□□□ -1.03
MSH3-202ENST00000512258 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
MSH3-202ENST00000512258 RAD54L2Q9Y4B4 1467 aa8.63□□□□□ -1.03
MSH3-202ENST00000512258 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
MSH3-202ENST00000512258 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
MSH3-202ENST00000512258 KRTAP4-12Q9BQ66 201 aa8.62□□□□□ -1.03
MSH3-202ENST00000512258 ARHGEF10LQ9HCE6 1279 aa8.62□□□□□ -1.03
MSH3-202ENST00000512258 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
MSH3-202ENST00000512258 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
MSH3-202ENST00000512258 NDFIP2Q9NV92 336 aa8.61□□□□□ -1.03
MSH3-202ENST00000512258 HRH3Q9Y5N1 445 aa8.61□□□□□ -1.03
MSH3-202ENST00000512258 FBXO45P0C2W1 286 aa8.6□□□□□ -1.03
MSH3-202ENST00000512258 CYP2U1Q7Z449 544 aa8.6□□□□□ -1.03
MSH3-202ENST00000512258 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
MSH3-202ENST00000512258 PCDHB9Q9Y5E1 797 aa8.6□□□□□ -1.03
MSH3-202ENST00000512258 GNB5O14775 395 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 IL2RAP01589 272 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 DGKGP49619 791 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 SOGA1O94964 1423 aa8.59□□□□□ -1.03
MSH3-202ENST00000512258 TARBP1Q13395 1621 aaKnown RBP8.58□□□□□ -1.04
MSH3-202ENST00000512258 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
MSH3-202ENST00000512258 CTBSQ01459 385 aa8.58□□□□□ -1.04
MSH3-202ENST00000512258 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
MSH3-202ENST00000512258 RAB6BQ9NRW1 208 aa8.58□□□□□ -1.04
MSH3-202ENST00000512258 PHF24Q9UPV7 400 aa8.58□□□□□ -1.04
MSH3-202ENST00000512258 EPXP11678 715 aa8.57□□□□□ -1.04
MSH3-202ENST00000512258 PHKA2P46019 1235 aa8.57□□□□□ -1.04
MSH3-202ENST00000512258 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
MSH3-202ENST00000512258 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
MSH3-202ENST00000512258 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
MSH3-202ENST00000512258 ZNF608Q9ULD9 1512 aaPredicted RBP8.57□□□□□ -1.04
MSH3-202ENST00000512258 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 CENPCQ03188 943 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 DOC2BQ14184 412 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
MSH3-202ENST00000512258 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 FHDC1Q9C0D6 1143 aaPredicted RBP8.56□□□□□ -1.04
MSH3-202ENST00000512258 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
MSH3-202ENST00000512258 IFT140Q96RY7 1462 aa8.56□□□□□ -1.04
MSH3-202ENST00000512258 WDR97A6NE52 1622 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 BNIP3LO60238 219 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 BMP4P12644 408 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 AMPD1P23109 780 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 LCE3BQ5TA77 95 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
MSH3-202ENST00000512258 RUBCNLQ9H714 662 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms