RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 USP4Q13107 963 aa14.95□□□□□ -0.02
USP53-206ENST00000510737 FOXR1Q6PIV2 292 aa14.95□□□□□ -0.02
USP53-206ENST00000510737 SCNN1DP51172 638 aa14.94□□□□□ -0.02
USP53-206ENST00000510737 UBAP2LQ14157 1087 aaKnown RBP14.94□□□□□ -0.02
USP53-206ENST00000510737 TMEM151AQ8N4L1 468 aa14.94□□□□□ -0.02
USP53-206ENST00000510737 ACDQ96AP0 544 aa14.93□□□□□ -0.02
USP53-206ENST00000510737 IRS1P35568 1242 aa14.92□□□□□ -0.02
USP53-206ENST00000510737 ESCO1Q5FWF5 840 aa14.91□□□□□ -0.02
USP53-206ENST00000510737 COG6Q9Y2V7 657 aa14.91□□□□□ -0.02
USP53-206ENST00000510737 A0A1B0GTH6 734 aa14.9□□□□□ -0.02
USP53-206ENST00000510737 RNF225M0QZC1 329 aaPredicted RBP14.9□□□□□ -0.02
USP53-206ENST00000510737 TMEM214Q6NUQ4 689 aaKnown RBP14.9□□□□□ -0.02
USP53-206ENST00000510737 PLPP7Q8NBV4 271 aa14.9□□□□□ -0.02
USP53-206ENST00000510737 TRERF1Q96PN7 1200 aa14.9□□□□□ -0.02
USP53-206ENST00000510737 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
USP53-206ENST00000510737 MARSP56192 900 aaKnown RBP14.89□□□□□ -0.03
USP53-206ENST00000510737 MAP3K10Q02779 954 aa14.89□□□□□ -0.03
USP53-206ENST00000510737 WASHC4Q2M389 1173 aa14.89□□□□□ -0.03
USP53-206ENST00000510737 MX2P20592 715 aa14.88□□□□□ -0.03
USP53-206ENST00000510737 MSX1P28360 303 aa14.88□□□□□ -0.03
USP53-206ENST00000510737 GNASQ5JWF2 1037 aa14.88□□□□□ -0.03
USP53-206ENST00000510737 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
USP53-206ENST00000510737 RUBCNLQ9H714 662 aa14.88□□□□□ -0.03
USP53-206ENST00000510737 TLR1Q15399 786 aa14.87□□□□□ -0.03
USP53-206ENST00000510737 GDF10P55107 478 aa14.86□□□□□ -0.03
USP53-206ENST00000510737 RHBDD1Q8TEB9 315 aa14.86□□□□□ -0.03
USP53-206ENST00000510737 INHAP05111 366 aa14.85□□□□□ -0.03
USP53-206ENST00000510737 BCRP11274 1271 aa14.85□□□□□ -0.03
USP53-206ENST00000510737 SEMA3FQ13275 785 aa14.85□□□□□ -0.03
USP53-206ENST00000510737 POM121Q96HA1 1249 aa14.85□□□□□ -0.03
USP53-206ENST00000510737 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
USP53-206ENST00000510737 CFHR5Q9BXR6 569 aa14.84□□□□□ -0.03
USP53-206ENST00000510737 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
USP53-206ENST00000510737 SCARF2Q96GP6 870 aaPredicted RBP14.83□□□□□ -0.04
USP53-206ENST00000510737 CNTNAP5Q8WYK1 1306 aa14.83□□□□□ -0.04
USP53-206ENST00000510737 ZNF295-AS1Q8N0V1 137 aa14.82□□□□□ -0.04
USP53-206ENST00000510737 TMEM229AB2RXF0 380 aa14.81□□□□□ -0.04
USP53-206ENST00000510737 GTF2E1P29083 439 aaPredicted RBP14.8□□□□□ -0.04
USP53-206ENST00000510737 SOX11P35716 441 aa14.8□□□□□ -0.04
USP53-206ENST00000510737 PLA2G4AP47712 749 aa14.8□□□□□ -0.04
USP53-206ENST00000510737 C1orf229Q6ZS94 237 aaPredicted RBP14.8□□□□□ -0.04
USP53-206ENST00000510737 ALG2Q9H553 416 aa14.8□□□□□ -0.04
USP53-206ENST00000510737 ENAMQ9NRM1 1142 aa14.8□□□□□ -0.04
USP53-206ENST00000510737 USP3Q9Y6I4 520 aa14.8□□□□□ -0.04
USP53-206ENST00000510737 NDFIP2Q9NV92 336 aa14.79□□□□□ -0.04
USP53-206ENST00000510737 SERTAD1Q9UHV2 236 aa14.79□□□□□ -0.04
USP53-206ENST00000510737 PCDHGA11Q9Y5H2 935 aa14.79□□□□□ -0.04
USP53-206ENST00000510737 ATP4AP20648 1035 aa14.78□□□□□ -0.04
USP53-206ENST00000510737 SMTNP53814 917 aa14.78□□□□□ -0.04
USP53-206ENST00000510737 KANK3Q6NY19 840 aa14.78□□□□□ -0.04
USP53-206ENST00000510737 C2CD2LO14523 706 aa14.77□□□□□ -0.05
USP53-206ENST00000510737 OIP5O43482 229 aa14.77□□□□□ -0.05
USP53-206ENST00000510737 LBRQ14739 615 aaKnown RBP14.77□□□□□ -0.05
USP53-206ENST00000510737 KLRG1Q96E93 195 aa14.77□□□□□ -0.05
USP53-206ENST00000510737 ABHD17AQ96GS6 310 aa14.77□□□□□ -0.05
USP53-206ENST00000510737 OXCT2Q9BYC2 517 aaPredicted RBP14.77□□□□□ -0.05
USP53-206ENST00000510737 CRISPLD1Q9H336 500 aa14.77□□□□□ -0.05
USP53-206ENST00000510737 DNAAF2Q9NVR5 837 aaKnown RBP14.77□□□□□ -0.05
USP53-206ENST00000510737 DNMT3AQ9Y6K1 912 aaPredicted RBP14.77□□□□□ -0.05
USP53-206ENST00000510737 BNIP3LO60238 219 aa14.76□□□□□ -0.05
USP53-206ENST00000510737 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
USP53-206ENST00000510737 PGBD3Q8N328 593 aa14.76□□□□□ -0.05
USP53-206ENST00000510737 HCN2Q9UL51 889 aa14.76□□□□□ -0.05
USP53-206ENST00000510737 IQSEC3Q9UPP2 1182 aaPredicted RBP14.76□□□□□ -0.05
USP53-206ENST00000510737 SHISA8B8ZZ34 492 aa14.75□□□□□ -0.05
USP53-206ENST00000510737 MAP2K3P46734 347 aa14.75□□□□□ -0.05
USP53-206ENST00000510737 NEDD1Q8NHV4 660 aa14.75□□□□□ -0.05
USP53-206ENST00000510737 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
USP53-206ENST00000510737 NSFL1CQ9UNZ2 370 aaKnown RBP14.75□□□□□ -0.05
USP53-206ENST00000510737 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
USP53-206ENST00000510737 CTBSQ01459 385 aa14.73□□□□□ -0.05
USP53-206ENST00000510737 MTFR1Q15390 333 aa14.73□□□□□ -0.05
USP53-206ENST00000510737 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
USP53-206ENST00000510737 SKIP12755 728 aa14.72□□□□□ -0.05
USP53-206ENST00000510737 EFHC2Q5JST6 749 aa14.72□□□□□ -0.05
USP53-206ENST00000510737 ATXN7L1Q9ULK2 861 aaPredicted RBP14.72□□□□□ -0.05
USP53-206ENST00000510737 PHF24Q9UPV7 400 aa14.72□□□□□ -0.05
USP53-206ENST00000510737 SNRPNP63162 240 aaKnown RBP14.71□□□□□ -0.05
USP53-206ENST00000510737 SUZ12Q15022 739 aaKnown RBP14.71□□□□□ -0.05
USP53-206ENST00000510737 GPAT2Q6NUI2 795 aa14.71□□□□□ -0.05
USP53-206ENST00000510737 ADAMTS19Q8TE59 1207 aa14.71□□□□□ -0.05
USP53-206ENST00000510737 NIFKQ9BYG3 293 aaKnown RBP14.71□□□□□ -0.05
USP53-206ENST00000510737 A6NJY4 79 aa14.7□□□□□ -0.06
USP53-206ENST00000510737 POM121CA8CG34 1229 aa14.7□□□□□ -0.06
USP53-206ENST00000510737 ITGB2P05107 769 aa14.69□□□□□ -0.06
USP53-206ENST00000510737 FGFR3P22607 806 aa14.69□□□□□ -0.06
USP53-206ENST00000510737 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
USP53-206ENST00000510737 ZCCHC2Q9C0B9 1178 aaKnown RBP14.69□□□□□ -0.06
USP53-206ENST00000510737 CDK2AP1O14519 115 aa14.68□□□□□ -0.06
USP53-206ENST00000510737 NCOA4Q13772 614 aa14.68□□□□□ -0.06
USP53-206ENST00000510737 GALNT6Q8NCL4 622 aa14.68□□□□□ -0.06
USP53-206ENST00000510737 DCAF5Q96JK2 942 aa14.68□□□□□ -0.06
USP53-206ENST00000510737 EML3Q32P44 896 aa14.67□□□□□ -0.06
USP53-206ENST00000510737 DEPDC4Q8N2C3 294 aa14.67□□□□□ -0.06
USP53-206ENST00000510737 BEND7Q8N7W2 519 aaPredicted RBP14.67□□□□□ -0.06
USP53-206ENST00000510737 LOC100996750A0A140TA64 210 aa14.66□□□□□ -0.06
USP53-206ENST00000510737 BMP4P12644 408 aa14.66□□□□□ -0.06
USP53-206ENST00000510737 GTF2IP78347 998 aa14.66□□□□□ -0.06
USP53-206ENST00000510737 KRTAP4-6Q9BYQ5 205 aa14.66□□□□□ -0.06
USP53-206ENST00000510737 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms