RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PALM3A6NDB9 673 aaPredicted RBP8.52□□□□□ -1.05
NFKB1-208ENST00000509165 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
NFKB1-208ENST00000509165 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
NFKB1-208ENST00000509165 CENPCQ03188 943 aa8.52□□□□□ -1.05
NFKB1-208ENST00000509165 NLRP3Q96P20 1036 aa8.52□□□□□ -1.05
NFKB1-208ENST00000509165 NISCHQ9Y2I1 1504 aa8.51□□□□□ -1.05
NFKB1-208ENST00000509165 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
NFKB1-208ENST00000509165 INHAP05111 366 aa8.51□□□□□ -1.05
NFKB1-208ENST00000509165 GDF10P55107 478 aa8.51□□□□□ -1.05
NFKB1-208ENST00000509165 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
NFKB1-208ENST00000509165 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
NFKB1-208ENST00000509165 ZBTB7BO15156 539 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-208ENST00000509165 GTF2IP78347 998 aa8.5□□□□□ -1.05
NFKB1-208ENST00000509165 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
NFKB1-208ENST00000509165 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
NFKB1-208ENST00000509165 IGHA1P01876 353 aa8.49□□□□□ -1.05
NFKB1-208ENST00000509165 RHOQP17081 205 aa8.49□□□□□ -1.05
NFKB1-208ENST00000509165 CLDN10P78369 228 aa8.49□□□□□ -1.05
NFKB1-208ENST00000509165 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
NFKB1-208ENST00000509165 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
NFKB1-208ENST00000509165 KIAA1024Q9UPX6 916 aa8.49□□□□□ -1.05
NFKB1-208ENST00000509165 IRS1P35568 1242 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 KRT76Q01546 638 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 POU4F2Q12837 409 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 CFAP70Q5T0N1 1121 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 ABCC9O60706 1549 aa8.48□□□□□ -1.05
NFKB1-208ENST00000509165 DKK1O94907 266 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 WDR44Q5JSH3 913 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
NFKB1-208ENST00000509165 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
NFKB1-208ENST00000509165 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
NFKB1-208ENST00000509165 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
NFKB1-208ENST00000509165 MTFR1Q15390 333 aa8.46□□□□□ -1.06
NFKB1-208ENST00000509165 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
NFKB1-208ENST00000509165 SMTNP53814 917 aa8.45□□□□□ -1.06
NFKB1-208ENST00000509165 TLR1Q15399 786 aa8.45□□□□□ -1.06
NFKB1-208ENST00000509165 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
NFKB1-208ENST00000509165 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
NFKB1-208ENST00000509165 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
NFKB1-208ENST00000509165 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
NFKB1-208ENST00000509165 ZNF358Q9NW07 568 aa8.45□□□□□ -1.06
NFKB1-208ENST00000509165 IQSEC3Q9UPP2 1182 aaPredicted RBP8.45□□□□□ -1.06
NFKB1-208ENST00000509165 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
NFKB1-208ENST00000509165 ITGA6P23229 1130 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 LMOD1P29536 600 aaPredicted RBP8.44□□□□□ -1.06
NFKB1-208ENST00000509165 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 SIX5Q8N196 739 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
NFKB1-208ENST00000509165 DNAAF2Q9NVR5 837 aaKnown RBP8.44□□□□□ -1.06
NFKB1-208ENST00000509165 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
NFKB1-208ENST00000509165 EPHA4P54764 986 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 PSME1Q06323 249 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 CUEDC1Q9NWM3 386 aaPredicted RBP8.43□□□□□ -1.06
NFKB1-208ENST00000509165 DYRK1BQ9Y463 629 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
NFKB1-208ENST00000509165 A6NJY4 79 aa8.42□□□□□ -1.06
NFKB1-208ENST00000509165 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
NFKB1-208ENST00000509165 CRTC2Q53ET0 693 aaPredicted RBP8.42□□□□□ -1.06
NFKB1-208ENST00000509165 ZNF385CQ66K41 422 aaPredicted RBP8.42□□□□□ -1.06
NFKB1-208ENST00000509165 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
NFKB1-208ENST00000509165 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 BACH1O14867 736 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 ADAM23O75077 832 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 RASA1P20936 1047 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
NFKB1-208ENST00000509165 FOXK2Q01167 660 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 PTK7Q13308 1070 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
NFKB1-208ENST00000509165 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
NFKB1-208ENST00000509165 M0R2N6 131 aa8.4□□□□□ -1.06
NFKB1-208ENST00000509165 PHKA2P46019 1235 aa8.4□□□□□ -1.06
NFKB1-208ENST00000509165 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
NFKB1-208ENST00000509165 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
NFKB1-208ENST00000509165 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
NFKB1-208ENST00000509165 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
NFKB1-208ENST00000509165 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
NFKB1-208ENST00000509165 PSMG3-AS1Q96PY0 264 aa8.39□□□□□ -1.07
NFKB1-208ENST00000509165 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 SFI1A8K8P3 1242 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L10C9JJH3 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
NFKB1-208ENST00000509165 USP17L21D6R901 530 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms