RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 USP4Q13107 963 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 KCTD17Q8N5Z5 321 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 ACDQ96AP0 544 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
USO1-202ENST00000508454 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
USO1-202ENST00000508454 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
USO1-202ENST00000508454 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
USO1-202ENST00000508454 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
USO1-202ENST00000508454 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
USO1-202ENST00000508454 POM121Q96HA1 1249 aa9.21□□□□□ -0.94
USO1-202ENST00000508454 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
USO1-202ENST00000508454 GDF11O95390 407 aa9.2□□□□□ -0.94
USO1-202ENST00000508454 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
USO1-202ENST00000508454 ESCO1Q5FWF5 840 aa9.2□□□□□ -0.94
USO1-202ENST00000508454 INHAP05111 366 aa9.19□□□□□ -0.94
USO1-202ENST00000508454 IRS1P35568 1242 aa9.19□□□□□ -0.94
USO1-202ENST00000508454 TLR1Q15399 786 aa9.19□□□□□ -0.94
USO1-202ENST00000508454 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
USO1-202ENST00000508454 TMEM151AQ8N4L1 468 aa9.19□□□□□ -0.94
USO1-202ENST00000508454 TMEM229AB2RXF0 380 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
USO1-202ENST00000508454 MSX1P28360 303 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 GDF10P55107 478 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 TMEM214Q6NUQ4 689 aaKnown RBP9.18□□□□□ -0.94
USO1-202ENST00000508454 RHBDD1Q8TEB9 315 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 ALG2Q9H553 416 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 RUBCNLQ9H714 662 aa9.18□□□□□ -0.94
USO1-202ENST00000508454 BCRP11274 1271 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 MX2P20592 715 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 GNASQ5JWF2 1037 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 HCN2Q9UL51 889 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 USP3Q9Y6I4 520 aa9.17□□□□□ -0.94
USO1-202ENST00000508454 ATP4AP20648 1035 aa9.16□□□□□ -0.94
USO1-202ENST00000508454 SOX11P35716 441 aa9.16□□□□□ -0.94
USO1-202ENST00000508454 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
USO1-202ENST00000508454 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
USO1-202ENST00000508454 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
USO1-202ENST00000508454 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
USO1-202ENST00000508454 C2CD2LO14523 706 aa9.15□□□□□ -0.94
USO1-202ENST00000508454 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
USO1-202ENST00000508454 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
USO1-202ENST00000508454 C1orf229Q6ZS94 237 aaPredicted RBP9.15□□□□□ -0.94
USO1-202ENST00000508454 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
USO1-202ENST00000508454 MARSP56192 900 aaKnown RBP9.14□□□□□ -0.95
USO1-202ENST00000508454 LBRQ14739 615 aaKnown RBP9.14□□□□□ -0.95
USO1-202ENST00000508454 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
USO1-202ENST00000508454 ADAMTS19Q8TE59 1207 aa9.14□□□□□ -0.95
USO1-202ENST00000508454 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
USO1-202ENST00000508454 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
USO1-202ENST00000508454 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
USO1-202ENST00000508454 SMTNP53814 917 aa9.13□□□□□ -0.95
USO1-202ENST00000508454 MTFR1Q15390 333 aa9.13□□□□□ -0.95
USO1-202ENST00000508454 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
USO1-202ENST00000508454 SHISA8B8ZZ34 492 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 OIP5O43482 229 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 BNIP3LO60238 219 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 ITGB2P05107 769 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 KLRG1Q96E93 195 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 SCARF2Q96GP6 870 aaPredicted RBP9.12□□□□□ -0.95
USO1-202ENST00000508454 ABHD17AQ96GS6 310 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 SERTAD1Q9UHV2 236 aa9.12□□□□□ -0.95
USO1-202ENST00000508454 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
USO1-202ENST00000508454 POM121CA8CG34 1229 aa9.11□□□□□ -0.95
USO1-202ENST00000508454 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
USO1-202ENST00000508454 OXCT2Q9BYC2 517 aaPredicted RBP9.11□□□□□ -0.95
USO1-202ENST00000508454 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
USO1-202ENST00000508454 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
USO1-202ENST00000508454 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 GTF2E1P29083 439 aaPredicted RBP9.09□□□□□ -0.95
USO1-202ENST00000508454 MAP2K3P46734 347 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 SNRPNP63162 240 aaKnown RBP9.09□□□□□ -0.95
USO1-202ENST00000508454 CTBSQ01459 385 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 ENAMQ9NRM1 1142 aa9.09□□□□□ -0.95
USO1-202ENST00000508454 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
USO1-202ENST00000508454 A6NJY4 79 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 CDK2AP1O14519 115 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 SKIP12755 728 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 EPHA4P54764 986 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 NCOA4Q13772 614 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 TBC1D9Q6ZT07 1266 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 PGBD3Q8N328 593 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 UCN2Q96RP3 112 aa9.08□□□□□ -0.96
USO1-202ENST00000508454 NIFKQ9BYG3 293 aaKnown RBP9.08□□□□□ -0.96
USO1-202ENST00000508454 FGFR3P22607 806 aa9.07□□□□□ -0.96
USO1-202ENST00000508454 EFHC2Q5JST6 749 aa9.07□□□□□ -0.96
USO1-202ENST00000508454 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
USO1-202ENST00000508454 ZCCHC2Q9C0B9 1178 aaKnown RBP9.07□□□□□ -0.96
USO1-202ENST00000508454 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
USO1-202ENST00000508454 PHF24Q9UPV7 400 aa9.07□□□□□ -0.96
USO1-202ENST00000508454 USP17L5A8MUK1 530 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms