RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
DDR1-260ENST00000507533 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
DDR1-260ENST00000507533 TMF1P82094 1093 aa19.52■□□□□ 0.72
DDR1-260ENST00000507533 TRAPPC3LQ5T215 181 aa19.52■□□□□ 0.72
DDR1-260ENST00000507533 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
DDR1-260ENST00000507533 TESK2Q96S53 571 aa19.51■□□□□ 0.71
DDR1-260ENST00000507533 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
DDR1-260ENST00000507533 FLT4P35916 1363 aa19.51■□□□□ 0.71
DDR1-260ENST00000507533 ITGB4P16144 1822 aa19.51■□□□□ 0.71
DDR1-260ENST00000507533 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
DDR1-260ENST00000507533 PLEKHG2Q9H7P9 1386 aa19.5■□□□□ 0.71
DDR1-260ENST00000507533 RTCBQ9Y3I0 505 aaKnown RBP19.5■□□□□ 0.71
DDR1-260ENST00000507533 KDM2BQ8NHM5 1336 aa19.5■□□□□ 0.71
DDR1-260ENST00000507533 MAP2P11137 1827 aaKnown RBP19.49■□□□□ 0.71
DDR1-260ENST00000507533 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
DDR1-260ENST00000507533 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
DDR1-260ENST00000507533 ST20-MTHFSA0A0A6YYL1 179 aa19.48■□□□□ 0.71
DDR1-260ENST00000507533 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
DDR1-260ENST00000507533 ATG3Q9NT62 314 aa19.48■□□□□ 0.71
DDR1-260ENST00000507533 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
DDR1-260ENST00000507533 KIF24Q5T7B8 1368 aa19.47■□□□□ 0.71
DDR1-260ENST00000507533 KCNA3P22001 575 aa19.47■□□□□ 0.71
DDR1-260ENST00000507533 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
DDR1-260ENST00000507533 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
DDR1-260ENST00000507533 KCPQ6ZWJ8 1503 aa19.46■□□□□ 0.71
DDR1-260ENST00000507533 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
DDR1-260ENST00000507533 RNF181Q9P0P0 153 aa19.46■□□□□ 0.71
DDR1-260ENST00000507533 PIM2Q9P1W9 311 aa19.46■□□□□ 0.71
DDR1-260ENST00000507533 GYS1P13807 737 aa19.45■□□□□ 0.7
DDR1-260ENST00000507533 ADRA2BP18089 450 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 RFC4P35249 363 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
DDR1-260ENST00000507533 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 PKD1L3Q7Z443 1732 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 PCNTO95613 3336 aa19.44■□□□□ 0.7
DDR1-260ENST00000507533 PHKG2P15735 406 aa19.43■□□□□ 0.7
DDR1-260ENST00000507533 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
DDR1-260ENST00000507533 RC3H1Q5TC82 1133 aaKnown RBP19.43■□□□□ 0.7
DDR1-260ENST00000507533 DCAF5Q96JK2 942 aa19.43■□□□□ 0.7
DDR1-260ENST00000507533 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
DDR1-260ENST00000507533 RBM42Q9BTD8 480 aaKnown RBP19.42■□□□□ 0.7
DDR1-260ENST00000507533 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
DDR1-260ENST00000507533 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
DDR1-260ENST00000507533 RPS6KA4O75676 772 aa19.41■□□□□ 0.7
DDR1-260ENST00000507533 C4AP0C0L4 1744 aa19.41■□□□□ 0.7
DDR1-260ENST00000507533 HSPA1AP0DMV8 641 aaKnown RBP19.4■□□□□ 0.7
DDR1-260ENST00000507533 HSPA1BP0DMV9 641 aaKnown RBP19.4■□□□□ 0.7
DDR1-260ENST00000507533 EYA1Q99502 592 aa19.4■□□□□ 0.7
DDR1-260ENST00000507533 KDRP35968 1356 aa19.4■□□□□ 0.7
DDR1-260ENST00000507533 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
DDR1-260ENST00000507533 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
DDR1-260ENST00000507533 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
DDR1-260ENST00000507533 CHRNA5P30532 468 aa19.36■□□□□ 0.69
DDR1-260ENST00000507533 BRCA1P38398 1863 aaKnown RBP19.36■□□□□ 0.69
DDR1-260ENST00000507533 ARFGEF1Q9Y6D6 1849 aa19.35■□□□□ 0.69
DDR1-260ENST00000507533 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
DDR1-260ENST00000507533 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
DDR1-260ENST00000507533 VEGFAP15692 232 aaPredicted RBP19.34■□□□□ 0.69
DDR1-260ENST00000507533 DDR1Q08345 913 aa19.34■□□□□ 0.69
DDR1-260ENST00000507533 FKBP8Q14318 412 aa19.34■□□□□ 0.69
DDR1-260ENST00000507533 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.69
DDR1-260ENST00000507533 RASSF7Q02833 373 aa19.33■□□□□ 0.68
DDR1-260ENST00000507533 ZC3H4Q9UPT8 1303 aaKnown RBP19.32■□□□□ 0.68
DDR1-260ENST00000507533 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
DDR1-260ENST00000507533 KIF20BQ96Q89 1820 aa19.31■□□□□ 0.68
DDR1-260ENST00000507533 GLTPD2A6NH11 291 aa19.31■□□□□ 0.68
DDR1-260ENST00000507533 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
DDR1-260ENST00000507533 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
DDR1-260ENST00000507533 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
DDR1-260ENST00000507533 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
DDR1-260ENST00000507533 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
DDR1-260ENST00000507533 LMNB1P20700 586 aa19.29■□□□□ 0.68
DDR1-260ENST00000507533 CABP4P57796 275 aa19.29■□□□□ 0.68
DDR1-260ENST00000507533 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
DDR1-260ENST00000507533 TM4SF1P30408 202 aa19.28■□□□□ 0.68
DDR1-260ENST00000507533 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
DDR1-260ENST00000507533 COL5A3P25940 1745 aaPredicted RBP19.28■□□□□ 0.68
DDR1-260ENST00000507533 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
DDR1-260ENST00000507533 EIF4A2Q14240 407 aaKnown RBP19.27■□□□□ 0.68
DDR1-260ENST00000507533 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
DDR1-260ENST00000507533 SBF1O95248 1867 aa19.25■□□□□ 0.67
DDR1-260ENST00000507533 PLEKHO1Q53GL0 409 aaPredicted RBP19.25■□□□□ 0.67
DDR1-260ENST00000507533 ZPR1O75312 459 aa19.24■□□□□ 0.67
DDR1-260ENST00000507533 ZNF530Q6P9A1 599 aaPredicted RBP19.24■□□□□ 0.67
DDR1-260ENST00000507533 MYH14Q7Z406 1995 aaKnown RBP19.24■□□□□ 0.67
DDR1-260ENST00000507533 POTECB2RU33 542 aa19.23■□□□□ 0.67
DDR1-260ENST00000507533 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
DDR1-260ENST00000507533 INTS5Q6P9B9 1019 aaKnown RBP19.23■□□□□ 0.67
DDR1-260ENST00000507533 MTHFSP49914 203 aa19.22■□□□□ 0.67
DDR1-260ENST00000507533 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
DDR1-260ENST00000507533 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
DDR1-260ENST00000507533 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
DDR1-260ENST00000507533 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
DDR1-260ENST00000507533 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
DDR1-260ENST00000507533 DPY19L2Q6NUT2 758 aa19.21■□□□□ 0.67
DDR1-260ENST00000507533 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
DDR1-260ENST00000507533 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
DDR1-260ENST00000507533 NFKBIEO00221 500 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms