RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ITGB4P16144 1822 aa14.74□□□□□ -0.05
SNCA-207ENST00000502987 EYA1Q99502 592 aa14.74□□□□□ -0.05
SNCA-207ENST00000502987 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
SNCA-207ENST00000502987 CHD4Q14839 1912 aa14.73□□□□□ -0.05
SNCA-207ENST00000502987 SMARCC1Q92922 1105 aaPredicted RBP14.73□□□□□ -0.05
SNCA-207ENST00000502987 PANK3Q9H999 370 aa14.73□□□□□ -0.05
SNCA-207ENST00000502987 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SNCA-207ENST00000502987 COL23A1Q86Y22 540 aaPredicted RBP14.72□□□□□ -0.05
SNCA-207ENST00000502987 GABBR2O75899 941 aa14.71□□□□□ -0.05
SNCA-207ENST00000502987 MSL1Q68DK7 614 aa14.71□□□□□ -0.05
SNCA-207ENST00000502987 AK7Q96M32 723 aa14.71□□□□□ -0.05
SNCA-207ENST00000502987 C5P01031 1676 aa14.71□□□□□ -0.06
SNCA-207ENST00000502987 PKD1L3Q7Z443 1732 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 ANKRD26Q9UPS8 1709 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 EIF4A2Q14240 407 aaKnown RBP14.7□□□□□ -0.06
SNCA-207ENST00000502987 IFNL2Q8IZJ0 200 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 FLAD1Q8NFF5 587 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 PIGBQ92521 554 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 TMOD3Q9NYL9 352 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 TAF1LQ8IZX4 1826 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 UTRNP46939 3433 aa14.7□□□□□ -0.06
SNCA-207ENST00000502987 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
SNCA-207ENST00000502987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNCA-207ENST00000502987 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
SNCA-207ENST00000502987 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
SNCA-207ENST00000502987 PHF14O94880 888 aa14.68□□□□□ -0.06
SNCA-207ENST00000502987 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
SNCA-207ENST00000502987 PHKG2P15735 406 aa14.67□□□□□ -0.06
SNCA-207ENST00000502987 NLGN2Q8NFZ4 835 aa14.67□□□□□ -0.06
SNCA-207ENST00000502987 KNSTRNQ9Y448 316 aa14.67□□□□□ -0.06
SNCA-207ENST00000502987 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
SNCA-207ENST00000502987 ZNF784Q8NCA9 323 aaPredicted RBP14.66□□□□□ -0.06
SNCA-207ENST00000502987 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
SNCA-207ENST00000502987 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 SIK1P57059 783 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 PLEKHO1Q53GL0 409 aaPredicted RBP14.65□□□□□ -0.06
SNCA-207ENST00000502987 ASAP1Q9ULH1 1129 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 C4BP0C0L5 1744 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
SNCA-207ENST00000502987 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
SNCA-207ENST00000502987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.63□□□□□ -0.07
SNCA-207ENST00000502987 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
SNCA-207ENST00000502987 ZNF530Q6P9A1 599 aaPredicted RBP14.63□□□□□ -0.07
SNCA-207ENST00000502987 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
SNCA-207ENST00000502987 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
SNCA-207ENST00000502987 GNPATO15228 680 aa14.62□□□□□ -0.07
SNCA-207ENST00000502987 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
SNCA-207ENST00000502987 ATG3Q9NT62 314 aa14.62□□□□□ -0.07
SNCA-207ENST00000502987 IGSF1Q8N6C5 1336 aa14.62□□□□□ -0.07
SNCA-207ENST00000502987 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 GRIN3BO60391 1043 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 CABP4P57796 275 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 AMOTQ4VCS5 1084 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 DCAF5Q96JK2 942 aa14.61□□□□□ -0.07
SNCA-207ENST00000502987 SSFA2P28290 1259 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 MTHFSP49914 203 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 ITPK1Q13572 414 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 AMIGO3Q86WK7 504 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
SNCA-207ENST00000502987 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
SNCA-207ENST00000502987 YBX3P16989 372 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNCA-207ENST00000502987 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
SNCA-207ENST00000502987 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
SNCA-207ENST00000502987 RTCBQ9Y3I0 505 aaKnown RBP14.58□□□□□ -0.08
SNCA-207ENST00000502987 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
SNCA-207ENST00000502987 WWC3Q9ULE0 1092 aa14.57□□□□□ -0.08
SNCA-207ENST00000502987 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
SNCA-207ENST00000502987 CC2D1BQ5T0F9 858 aaKnown RBP14.55□□□□□ -0.08
SNCA-207ENST00000502987 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
SNCA-207ENST00000502987 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
SNCA-207ENST00000502987 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
SNCA-207ENST00000502987 GIGYF1O75420 1035 aaPredicted RBP14.54□□□□□ -0.08
SNCA-207ENST00000502987 IL13P35225 146 aa14.54□□□□□ -0.08
SNCA-207ENST00000502987 RFC4P35249 363 aa14.54□□□□□ -0.08
SNCA-207ENST00000502987 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
SNCA-207ENST00000502987 MMP10P09238 476 aa14.53□□□□□ -0.08
SNCA-207ENST00000502987 HMOX1P09601 288 aa14.53□□□□□ -0.08
SNCA-207ENST00000502987 RC3H1Q5TC82 1133 aaKnown RBP14.53□□□□□ -0.08
SNCA-207ENST00000502987 SLC4A9Q96Q91 983 aa14.53□□□□□ -0.08
SNCA-207ENST00000502987 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.08
SNCA-207ENST00000502987 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
SNCA-207ENST00000502987 C1QTNF8P60827 252 aa14.52□□□□□ -0.09
SNCA-207ENST00000502987 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
SNCA-207ENST00000502987 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.09
SNCA-207ENST00000502987 RPS6KA4O75676 772 aa14.51□□□□□ -0.09
SNCA-207ENST00000502987 AKAP4Q5JQC9 854 aa14.51□□□□□ -0.09
SNCA-207ENST00000502987 KDRP35968 1356 aa14.5□□□□□ -0.09
SNCA-207ENST00000502987 DIAPH1O60610 1272 aaKnown RBP14.5□□□□□ -0.09
SNCA-207ENST00000502987 PARP3Q9Y6F1 533 aa14.5□□□□□ -0.09
SNCA-207ENST00000502987 SCN11AQ9UI33 1791 aa14.5□□□□□ -0.09
SNCA-207ENST00000502987 ZNF831Q5JPB2 1677 aa14.49□□□□□ -0.09
SNCA-207ENST00000502987 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
SNCA-207ENST00000502987 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
SNCA-207ENST00000502987 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
SNCA-207ENST00000502987 ZNF526Q8TF50 670 aaPredicted RBP14.49□□□□□ -0.09
SNCA-207ENST00000502987 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
SNCA-207ENST00000502987 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms