RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 C10orf71Q711Q0 1435 aa8.65□□□□□ -1.02
CBX1-205ENST00000495350 CYP27B1O15528 508 aa8.65□□□□□ -1.02
CBX1-205ENST00000495350 DPEP1P16444 411 aa8.65□□□□□ -1.02
CBX1-205ENST00000495350 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.02
CBX1-205ENST00000495350 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
CBX1-205ENST00000495350 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
CBX1-205ENST00000495350 FLT4P35916 1363 aa8.64□□□□□ -1.03
CBX1-205ENST00000495350 HSPA1AP0DMV8 641 aaKnown RBP8.64□□□□□ -1.03
CBX1-205ENST00000495350 HSPA1BP0DMV9 641 aaKnown RBP8.64□□□□□ -1.03
CBX1-205ENST00000495350 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
CBX1-205ENST00000495350 PIM2Q9P1W9 311 aa8.64□□□□□ -1.03
CBX1-205ENST00000495350 PCNTO95613 3336 aa8.64□□□□□ -1.03
CBX1-205ENST00000495350 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
CBX1-205ENST00000495350 INSRP06213 1382 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 ADRA2BP18089 450 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 RFC4P35249 363 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 ITPK1Q13572 414 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
CBX1-205ENST00000495350 SIN3AQ96ST3 1273 aa8.63□□□□□ -1.03
CBX1-205ENST00000495350 ITGB4P16144 1822 aa8.62□□□□□ -1.03
CBX1-205ENST00000495350 KIF13BQ9NQT8 1826 aa8.62□□□□□ -1.03
CBX1-205ENST00000495350 SLC24A1O60721 1099 aa8.62□□□□□ -1.03
CBX1-205ENST00000495350 GGNBP2Q9H3C7 697 aa8.62□□□□□ -1.03
CBX1-205ENST00000495350 ASAP1Q9ULH1 1129 aa8.62□□□□□ -1.03
CBX1-205ENST00000495350 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
CBX1-205ENST00000495350 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
CBX1-205ENST00000495350 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
CBX1-205ENST00000495350 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
CBX1-205ENST00000495350 DCAF5Q96JK2 942 aa8.61□□□□□ -1.03
CBX1-205ENST00000495350 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
CBX1-205ENST00000495350 C4AP0C0L4 1744 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 PKD1L3Q7Z443 1732 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 FYB1O15117 783 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
CBX1-205ENST00000495350 GYS1P13807 737 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
CBX1-205ENST00000495350 IFNL2Q8IZJ0 200 aa8.6□□□□□ -1.03
CBX1-205ENST00000495350 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
CBX1-205ENST00000495350 MAP2P11137 1827 aaKnown RBP8.59□□□□□ -1.03
CBX1-205ENST00000495350 ARFGEF1Q9Y6D6 1849 aa8.59□□□□□ -1.03
CBX1-205ENST00000495350 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.03
CBX1-205ENST00000495350 RC3H1Q5TC82 1133 aaKnown RBP8.59□□□□□ -1.03
CBX1-205ENST00000495350 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
CBX1-205ENST00000495350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.59□□□□□ -1.031e-7■■□□□ 11.7
CBX1-205ENST00000495350 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
CBX1-205ENST00000495350 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
CBX1-205ENST00000495350 PHKG2P15735 406 aa8.58□□□□□ -1.04
CBX1-205ENST00000495350 KCNA3P22001 575 aa8.58□□□□□ -1.04
CBX1-205ENST00000495350 KDRP35968 1356 aa8.58□□□□□ -1.04
CBX1-205ENST00000495350 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 SLC34A2O95436 690 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
CBX1-205ENST00000495350 LMNB1P20700 586 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 RASSF7Q02833 373 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 EMILIN1Q9Y6C2 1016 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 TONSLQ96HA7 1378 aa8.57□□□□□ -1.04
CBX1-205ENST00000495350 ST20-MTHFSA0A0A6YYL1 179 aa8.56□□□□□ -1.04
CBX1-205ENST00000495350 CHRNA5P30532 468 aa8.56□□□□□ -1.04
CBX1-205ENST00000495350 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
CBX1-205ENST00000495350 TESK2Q96S53 571 aa8.56□□□□□ -1.04
CBX1-205ENST00000495350 NCAPD2Q15021 1401 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 ERVV-2B6SEH9 535 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 ZPR1O75312 459 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
CBX1-205ENST00000495350 CABP4P57796 275 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 EYA1Q99502 592 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 CREBZFQ9NS37 354 aa8.55□□□□□ -1.04
CBX1-205ENST00000495350 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
CBX1-205ENST00000495350 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
CBX1-205ENST00000495350 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
CBX1-205ENST00000495350 DDR1Q08345 913 aa8.54□□□□□ -1.04
CBX1-205ENST00000495350 FKBP8Q14318 412 aa8.54□□□□□ -1.04
CBX1-205ENST00000495350 SLC4A9Q96Q91 983 aa8.54□□□□□ -1.04
CBX1-205ENST00000495350 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
CBX1-205ENST00000495350 SRP68Q9UHB9 627 aaKnown RBP8.54□□□□□ -1.04
CBX1-205ENST00000495350 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
CBX1-205ENST00000495350 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
CBX1-205ENST00000495350 FOXN1O15353 648 aa8.53□□□□□ -1.04
CBX1-205ENST00000495350 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
CBX1-205ENST00000495350 TTLL6Q8N841 843 aa8.53□□□□□ -1.04
CBX1-205ENST00000495350 SBF1O95248 1867 aa8.53□□□□□ -1.04
CBX1-205ENST00000495350 KDM6AO15550 1401 aaPredicted RBP8.53□□□□□ -1.04
CBX1-205ENST00000495350 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
CBX1-205ENST00000495350 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
CBX1-205ENST00000495350 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
CBX1-205ENST00000495350 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
CBX1-205ENST00000495350 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.05
CBX1-205ENST00000495350 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
CBX1-205ENST00000495350 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
CBX1-205ENST00000495350 H0YIN7 160 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 MTHFSP49914 203 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 FAM161AQ3B820 660 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
CBX1-205ENST00000495350 CNTNAP1P78357 1384 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms