RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 THBS1P07996 1170 aa6.13□□□□□ -1.43
PRPF4-203ENST00000488937 PRRT3Q5FWE3 981 aa6.13□□□□□ -1.43
PRPF4-203ENST00000488937 CARD14Q9BXL6 1004 aa6.13□□□□□ -1.43
PRPF4-203ENST00000488937 ARAFP10398 606 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 AMHR2Q16671 573 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 HELBQ8NG08 1087 aaPredicted RBP6.12□□□□□ -1.43
PRPF4-203ENST00000488937 TSC1Q92574 1164 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 SLC10A4Q96EP9 437 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 NACC1Q96RE7 527 aa6.12□□□□□ -1.43
PRPF4-203ENST00000488937 SUPT5HO00267 1087 aaKnown RBP6.11□□□□□ -1.43
PRPF4-203ENST00000488937 LILRA1O75019 489 aa6.11□□□□□ -1.43
PRPF4-203ENST00000488937 ADD1P35611 737 aaKnown RBP6.11□□□□□ -1.43
PRPF4-203ENST00000488937 BRPF1P55201 1214 aaPredicted RBP6.11□□□□□ -1.43
PRPF4-203ENST00000488937 POU4F2Q12837 409 aa6.11□□□□□ -1.43
PRPF4-203ENST00000488937 ZNF784Q8NCA9 323 aaPredicted RBP6.11□□□□□ -1.43
PRPF4-203ENST00000488937 PCMTD2Q9NV79 361 aa6.11□□□□□ -1.43
PRPF4-203ENST00000488937 PCDHB15Q9Y5E8 787 aa6.11□□□□□ -1.43
PRPF4-203ENST00000488937 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
PRPF4-203ENST00000488937 NUTM2BA6NNL0 878 aaPredicted RBP6.09□□□□□ -1.43
PRPF4-203ENST00000488937 NUTM2EB1AL46 878 aaPredicted RBP6.09□□□□□ -1.43
PRPF4-203ENST00000488937 PER1O15534 1290 aaPredicted RBP6.09□□□□□ -1.43
PRPF4-203ENST00000488937 TUSC1Q2TAM9 212 aa6.09□□□□□ -1.43
PRPF4-203ENST00000488937 NUTM2DQ5VT03 806 aaPredicted RBP6.09□□□□□ -1.43
PRPF4-203ENST00000488937 NUTM2AQ8IVF1 878 aaPredicted RBP6.09□□□□□ -1.43
PRPF4-203ENST00000488937 TMPRSS4Q9NRS4 437 aa6.09□□□□□ -1.43
PRPF4-203ENST00000488937 NEURL1BA8MQ27 555 aa6.08□□□□□ -1.44
PRPF4-203ENST00000488937 UBAP2LQ14157 1087 aaKnown RBP6.08□□□□□ -1.44
PRPF4-203ENST00000488937 NBPF10Q6P3W6 841 aaKnown RBP6.08□□□□□ -1.44
PRPF4-203ENST00000488937 PDXDC2PQ6P474 469 aa6.08□□□□□ -1.44
PRPF4-203ENST00000488937 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
PRPF4-203ENST00000488937 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
PRPF4-203ENST00000488937 NBPF20Q3BBV1 942 aa6.07□□□□□ -1.44
PRPF4-203ENST00000488937 CABLES1Q8TDN4 633 aa6.07□□□□□ -1.44
PRPF4-203ENST00000488937 TIMMDC1Q9NPL8 285 aa6.07□□□□□ -1.44
PRPF4-203ENST00000488937 ZC3H4Q9UPT8 1303 aaKnown RBP6.06□□□□□ -1.44
PRPF4-203ENST00000488937 UBTFP17480 764 aaKnown RBP6.06□□□□□ -1.44
PRPF4-203ENST00000488937 LBRQ14739 615 aaKnown RBP6.06□□□□□ -1.44
PRPF4-203ENST00000488937 CSPP1Q1MSJ5 1256 aa6.06□□□□□ -1.44
PRPF4-203ENST00000488937 ZBTB33Q86T24 672 aa6.06□□□□□ -1.44
PRPF4-203ENST00000488937 SPATA31C2B4DYI2 1134 aa6.05□□□□□ -1.44
PRPF4-203ENST00000488937 FGFR3P22607 806 aa6.05□□□□□ -1.44
PRPF4-203ENST00000488937 CTBSQ01459 385 aa6.05□□□□□ -1.44
PRPF4-203ENST00000488937 TRIM26Q12899 539 aaPredicted RBP6.05□□□□□ -1.44
PRPF4-203ENST00000488937 AK7Q96M32 723 aa6.04□□□□□ -1.44
PRPF4-203ENST00000488937 TRIM66O15016 1216 aa6.03□□□□□ -1.44
PRPF4-203ENST00000488937 SLC27A3Q5K4L6 730 aa6.03□□□□□ -1.44
PRPF4-203ENST00000488937 SLC24A3Q9HC58 644 aa6.03□□□□□ -1.44
PRPF4-203ENST00000488937 LILRB3O75022 631 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 ADH6P28332 368 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 PTK2Q05397 1052 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 NPM2Q86SE8 214 aaKnown RBP6.02□□□□□ -1.45
PRPF4-203ENST00000488937 PNMA1Q8ND90 353 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 ABHD17AQ96GS6 310 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 GRIP2Q9C0E4 1043 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 NDFIP2Q9NV92 336 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 GPSM3Q9Y4H4 160 aa6.02□□□□□ -1.45
PRPF4-203ENST00000488937 OAS3Q9Y6K5 1087 aaKnown RBP6.02□□□□□ -1.45
PRPF4-203ENST00000488937 C9orf172C9J069 976 aa6.01□□□□□ -1.45
PRPF4-203ENST00000488937 MEN1O00255 615 aa6.01□□□□□ -1.45
PRPF4-203ENST00000488937 ADGRE1Q14246 886 aa6.01□□□□□ -1.45
PRPF4-203ENST00000488937 TAS1R3Q7RTX0 852 aa6.01□□□□□ -1.45
PRPF4-203ENST00000488937 FKBPLQ9UIM3 349 aa6.01□□□□□ -1.45
PRPF4-203ENST00000488937 ERVH48-1M5A8F1 160 aa6□□□□□ -1.45
PRPF4-203ENST00000488937 WASLO00401 505 aaPredicted RBP6□□□□□ -1.45
PRPF4-203ENST00000488937 TXNRD3Q86VQ6 643 aa6□□□□□ -1.45
PRPF4-203ENST00000488937 PARP9Q8IXQ6 854 aa6□□□□□ -1.45
PRPF4-203ENST00000488937 TP53INP1Q96A56 240 aa6□□□□□ -1.45
PRPF4-203ENST00000488937 GPAMQ9HCL2 828 aa6□□□□□ -1.45
PRPF4-203ENST00000488937 ATP5J2-PTCD1G3V325 749 aa5.99□□□□□ -1.45
PRPF4-203ENST00000488937 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
PRPF4-203ENST00000488937 MBTPS1Q14703 1052 aa5.99□□□□□ -1.45
PRPF4-203ENST00000488937 QPCTQ16769 361 aa5.99□□□□□ -1.45
PRPF4-203ENST00000488937 MYSM1Q5VVJ2 828 aa5.99□□□□□ -1.45
PRPF4-203ENST00000488937 FCHSD1Q86WN1 690 aa5.99□□□□□ -1.45
PRPF4-203ENST00000488937 AVENQ9NQS1 362 aaPredicted RBP5.99□□□□□ -1.45
PRPF4-203ENST00000488937 A0A1W2PRU2 124 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 BNIP3LO60238 219 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 PDE4DQ08499 809 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 GRIK4Q16099 956 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 LIMD1Q9UGP4 676 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 KLF15Q9UIH9 416 aa5.98□□□□□ -1.45
PRPF4-203ENST00000488937 CD97P48960 835 aa5.97□□□□□ -1.45
PRPF4-203ENST00000488937 GP2P55259 537 aaKnown RBP5.97□□□□□ -1.45
PRPF4-203ENST00000488937 FBLN7Q53RD9 439 aa5.97□□□□□ -1.45
PRPF4-203ENST00000488937 CCDC125Q86Z20 511 aa5.97□□□□□ -1.45
PRPF4-203ENST00000488937 SEPT12Q8IYM1 358 aa5.97□□□□□ -1.45
PRPF4-203ENST00000488937 A0A1B0GTH6 734 aa5.96□□□□□ -1.46
PRPF4-203ENST00000488937 PPP2R2DQ66LE6 453 aa5.96□□□□□ -1.46
PRPF4-203ENST00000488937 NLRP3Q96P20 1036 aa5.96□□□□□ -1.46
PRPF4-203ENST00000488937 RSPH6AQ9H0K4 717 aa5.96□□□□□ -1.46
PRPF4-203ENST00000488937 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 C8AP07357 584 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 CSB-PGBD3P0DP91 1061 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 CLK2P49760 499 aaKnown RBP5.95□□□□□ -1.46
PRPF4-203ENST00000488937 NEUROD2Q15784 382 aa5.95□□□□□ -1.46
PRPF4-203ENST00000488937 RTL5Q5HYW3 569 aaPredicted RBP5.95□□□□□ -1.46
PRPF4-203ENST00000488937 EFHC2Q5JST6 749 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms