RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 COL14A1Q05707 1796 aaKnown RBP9.01□□□□□ -0.97
SF3A3-206ENST00000487062 CACNA1FO60840 1977 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 PKD1L3Q7Z443 1732 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 FTSJ3Q8IY81 847 aaKnown RBP9.01□□□□□ -0.97
SF3A3-206ENST00000487062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.01□□□□□ -0.97
SF3A3-206ENST00000487062 SPG7Q9UQ90 795 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 SCN11AQ9UI33 1791 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 SOS1Q07889 1333 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-206ENST00000487062 WDR17Q8IZU2 1322 aa9.01□□□□□ -0.97
SF3A3-206ENST00000487062 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 KDM3BQ7LBC6 1761 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 TEFQ10587 303 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 ATF7IPQ6VMQ6 1270 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
SF3A3-206ENST00000487062 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 IL17REQ8NFR9 667 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 CHMP4AQ9BY43 222 aa9□□□□□ -0.97
SF3A3-206ENST00000487062 COL16A1Q07092 1604 aaPredicted RBP9□□□□□ -0.97
SF3A3-206ENST00000487062 COL5A2P05997 1499 aaPredicted RBP9□□□□□ -0.97
SF3A3-206ENST00000487062 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
SF3A3-206ENST00000487062 ELL2O00472 640 aaPredicted RBP8.99□□□□□ -0.97
SF3A3-206ENST00000487062 CAPN15O75808 1086 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 EVA1CP58658 441 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 TOM1L2Q6ZVM7 507 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 MRPL50Q8N5N7 158 aaKnown RBP8.99□□□□□ -0.97
SF3A3-206ENST00000487062 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 PANK1Q8TE04 598 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 ARHGAP45Q92619 1136 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 CHMP4BQ9H444 224 aaKnown RBP8.99□□□□□ -0.97
SF3A3-206ENST00000487062 NOB1Q9ULX3 412 aaKnown RBP8.99□□□□□ -0.97
SF3A3-206ENST00000487062 ADAMTS7Q9UKP4 1686 aa8.99□□□□□ -0.97
SF3A3-206ENST00000487062 RNMTO43148 476 aaKnown RBP8.98□□□□□ -0.97
SF3A3-206ENST00000487062 HSP90AB1P08238 724 aaKnown RBP8.98□□□□□ -0.97
SF3A3-206ENST00000487062 ARXQ96QS3 562 aa8.98□□□□□ -0.97
SF3A3-206ENST00000487062 API5Q9BZZ5 524 aaKnown RBP8.98□□□□□ -0.97
SF3A3-206ENST00000487062 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
SF3A3-206ENST00000487062 MEGF6O75095 1541 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 TRIM27P14373 513 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
SF3A3-206ENST00000487062 MPRIPQ6WCQ1 1025 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 IFNL2Q8IZJ0 200 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 CARD10Q9BWT7 1032 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 LGR6Q9HBX8 967 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
SF3A3-206ENST00000487062 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 PHKG2P15735 406 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 CENPQQ7L2Z9 268 aaPredicted RBP8.96□□□□□ -0.98
SF3A3-206ENST00000487062 STK31Q9BXU1 1019 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
SF3A3-206ENST00000487062 PLCH1Q4KWH8 1693 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 PTPRCP08575 1304 aa8.96□□□□□ -0.98
SF3A3-206ENST00000487062 SPDYE2BA6NHP3 402 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 BTBD11A6QL63 1104 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 HOXB7P09629 217 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 SPDYE6P0CI01 402 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 RLBP1P12271 317 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 IL2RBP14784 551 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 SPDYE2Q495Y8 402 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 ITPRIPQ8IWB1 547 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 ZCRB1Q8TBF4 217 aaKnown RBP8.95□□□□□ -0.98
SF3A3-206ENST00000487062 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 TNNQ9UQP3 1299 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 PCDH11XQ9BZA7 1347 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 PCDH11YQ9BZA8 1340 aa8.95□□□□□ -0.98
SF3A3-206ENST00000487062 TCERG1O14776 1098 aaKnown RBP8.94□□□□□ -0.98
SF3A3-206ENST00000487062 EIF4A1P60842 406 aaKnown RBP8.94□□□□□ -0.98
SF3A3-206ENST00000487062 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
SF3A3-206ENST00000487062 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
SF3A3-206ENST00000487062 TMEM57Q8N5G2 664 aa8.94□□□□□ -0.98
SF3A3-206ENST00000487062 RNF25Q96BH1 459 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-206ENST00000487062 NWD2Q9ULI1 1742 aa8.94□□□□□ -0.98
SF3A3-206ENST00000487062 WNK3Q9BYP7 1800 aa8.94□□□□□ -0.98
SF3A3-206ENST00000487062 ABCB7O75027 752 aa8.93□□□□□ -0.98
SF3A3-206ENST00000487062 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-206ENST00000487062 SLC52A2Q9HAB3 445 aa8.93□□□□□ -0.98
SF3A3-206ENST00000487062 ABCC4O15439 1325 aa8.93□□□□□ -0.98
SF3A3-206ENST00000487062 KDM6AO15550 1401 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-206ENST00000487062 MRC1P22897 1456 aa8.93□□□□□ -0.98
SF3A3-206ENST00000487062 SHANK3Q9BYB0 1731 aa8.93□□□□□ -0.98
SF3A3-206ENST00000487062 NRAPQ86VF7 1730 aa8.92□□□□□ -0.98
SF3A3-206ENST00000487062 KDM2BQ8NHM5 1336 aa8.92□□□□□ -0.98
SF3A3-206ENST00000487062 CYP27B1O15528 508 aa8.92□□□□□ -0.98
SF3A3-206ENST00000487062 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
SF3A3-206ENST00000487062 RWDD1Q9H446 243 aaPredicted RBP8.92□□□□□ -0.98
SF3A3-206ENST00000487062 DAXXQ9UER7 740 aaPredicted RBP8.92□□□□□ -0.98
SF3A3-206ENST00000487062 ZBTB47Q9UFB7 747 aaPredicted RBP8.92□□□□□ -0.98
SF3A3-206ENST00000487062 N4BP2Q86UW6 1770 aaPredicted RBP8.91□□□□□ -0.98
SF3A3-206ENST00000487062 CABP4P57796 275 aa8.91□□□□□ -0.98
SF3A3-206ENST00000487062 TMEM132AQ24JP5 1023 aa8.91□□□□□ -0.98
SF3A3-206ENST00000487062 TTC5Q8N0Z6 440 aa8.91□□□□□ -0.98
SF3A3-206ENST00000487062 CERKQ8TCT0 537 aa8.91□□□□□ -0.98
SF3A3-206ENST00000487062 JCADQ9P266 1359 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms