RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 MMP10P09238 476 aa10.24□□□□□ -0.77
CSDE1-206ENST00000483030 PHKG2P15735 406 aa10.24□□□□□ -0.77
CSDE1-206ENST00000483030 ATG3Q9NT62 314 aa10.24□□□□□ -0.77
CSDE1-206ENST00000483030 NSD3Q9BZ95 1437 aa10.24□□□□□ -0.77
CSDE1-206ENST00000483030 C5P01031 1676 aa10.23□□□□□ -0.77
CSDE1-206ENST00000483030 KIF3CO14782 793 aa10.23□□□□□ -0.77
CSDE1-206ENST00000483030 TRAPPC3LQ5T215 181 aa10.23□□□□□ -0.77
CSDE1-206ENST00000483030 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
CSDE1-206ENST00000483030 C4BP0C0L5 1744 aa10.22□□□□□ -0.77
CSDE1-206ENST00000483030 A0A0G2JLW4 131 aa10.22□□□□□ -0.77
CSDE1-206ENST00000483030 TNNT2P45379 298 aaPredicted RBP10.22□□□□□ -0.77
CSDE1-206ENST00000483030 RTCBQ9Y3I0 505 aaKnown RBP10.22□□□□□ -0.77
CSDE1-206ENST00000483030 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
CSDE1-206ENST00000483030 CEP350Q5VT06 3117 aa10.22□□□□□ -0.77
CSDE1-206ENST00000483030 TGFB2P61812 414 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.77
CSDE1-206ENST00000483030 ARHGAP27Q6ZUM4 889 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 NLGN1Q8N2Q7 840 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 SLC4A9Q96Q91 983 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 POLR3GLQ9BT43 218 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
CSDE1-206ENST00000483030 BCS1LQ9Y276 419 aa10.21□□□□□ -0.77
CSDE1-206ENST00000483030 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
CSDE1-206ENST00000483030 TOGARAM1Q9Y4F4 1720 aa10.19□□□□□ -0.78
CSDE1-206ENST00000483030 ERVV-2B6SEH9 535 aa10.19□□□□□ -0.78
CSDE1-206ENST00000483030 DPEP1P16444 411 aa10.19□□□□□ -0.78
CSDE1-206ENST00000483030 RFC4P35249 363 aa10.19□□□□□ -0.78
CSDE1-206ENST00000483030 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
CSDE1-206ENST00000483030 RPS6KA4O75676 772 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 FCHSD2O94868 740 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 HSP90AB1P08238 724 aaKnown RBP10.18□□□□□ -0.78
CSDE1-206ENST00000483030 GYS1P13807 737 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 CABP4P57796 275 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 PLEKHO1Q53GL0 409 aaPredicted RBP10.18□□□□□ -0.78
CSDE1-206ENST00000483030 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 CCDC87Q9NVE4 849 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
CSDE1-206ENST00000483030 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 PTCD1O75127 700 aaKnown RBP10.17□□□□□ -0.78
CSDE1-206ENST00000483030 TOMM70O94826 608 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 APLP1P51693 650 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
CSDE1-206ENST00000483030 NMRK2Q9NPI5 230 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
CSDE1-206ENST00000483030 UBR3Q6ZT12 1888 aa10.17□□□□□ -0.78
CSDE1-206ENST00000483030 PKD1L3Q7Z443 1732 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 KDRP35968 1356 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 KCNA3P22001 575 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 MTHFSP49914 203 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 DNAJC5GQ8N7S2 189 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 CNKSR2Q8WXI2 1034 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 MAP2P11137 1827 aaKnown RBP10.16□□□□□ -0.78
CSDE1-206ENST00000483030 ITGB4P16144 1822 aa10.16□□□□□ -0.78
CSDE1-206ENST00000483030 KIF20BQ96Q89 1820 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 AMOTQ4VCS5 1084 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 C9orf131Q5VYM1 1079 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 NFATC2IPQ8NCF5 419 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 PANK3Q9H999 370 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
CSDE1-206ENST00000483030 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.78
CSDE1-206ENST00000483030 C10orf71Q711Q0 1435 aa10.15□□□□□ -0.79
CSDE1-206ENST00000483030 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
CSDE1-206ENST00000483030 FKBP8Q14318 412 aa10.14□□□□□ -0.79
CSDE1-206ENST00000483030 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
CSDE1-206ENST00000483030 AEBP1Q8IUX7 1158 aa10.14□□□□□ -0.79
CSDE1-206ENST00000483030 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
CSDE1-206ENST00000483030 DDR1Q08345 913 aa10.13□□□□□ -0.79
CSDE1-206ENST00000483030 TRIM26Q12899 539 aaPredicted RBP10.13□□□□□ -0.79
CSDE1-206ENST00000483030 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
CSDE1-206ENST00000483030 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
CSDE1-206ENST00000483030 KDM6AO15550 1401 aaPredicted RBP10.13□□□□□ -0.79
CSDE1-206ENST00000483030 PLEKHG2Q9H7P9 1386 aa10.13□□□□□ -0.79
CSDE1-206ENST00000483030 CHRNA5P30532 468 aa10.12□□□□□ -0.79
CSDE1-206ENST00000483030 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
CSDE1-206ENST00000483030 MORC1Q86VD1 984 aa10.12□□□□□ -0.79
CSDE1-206ENST00000483030 C16orf71Q8IYS4 520 aaPredicted RBP10.12□□□□□ -0.79
CSDE1-206ENST00000483030 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
CSDE1-206ENST00000483030 USP42Q9H9J4 1324 aaKnown RBP10.11□□□□□ -0.79
CSDE1-206ENST00000483030 TM4SF1P30408 202 aa10.11□□□□□ -0.79
CSDE1-206ENST00000483030 HTRA3P83110 453 aa10.11□□□□□ -0.79
CSDE1-206ENST00000483030 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
CSDE1-206ENST00000483030 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
CSDE1-206ENST00000483030 ZPR1O75312 459 aa10.1□□□□□ -0.79
CSDE1-206ENST00000483030 DNAJC10Q8IXB1 793 aa10.1□□□□□ -0.79
CSDE1-206ENST00000483030 RRAGCQ9HB90 399 aa10.1□□□□□ -0.79
CSDE1-206ENST00000483030 ANKRD26Q9UPS8 1709 aa10.1□□□□□ -0.79
CSDE1-206ENST00000483030 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
CSDE1-206ENST00000483030 POLRMTO00411 1230 aaKnown RBP10.09□□□□□ -0.79
CSDE1-206ENST00000483030 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
CSDE1-206ENST00000483030 IL13P35225 146 aa10.09□□□□□ -0.79
CSDE1-206ENST00000483030 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSDE1-206ENST00000483030 FSTL1Q12841 308 aa10.09□□□□□ -0.79
CSDE1-206ENST00000483030 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
CSDE1-206ENST00000483030 LGR6Q9HBX8 967 aa10.09□□□□□ -0.79
CSDE1-206ENST00000483030 N4BP2Q86UW6 1770 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-206ENST00000483030 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
CSDE1-206ENST00000483030 SLC39A6Q13433 755 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms