RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 GPSM3Q9Y4H4 160 aa5.26□□□□□ -1.57
USH2A-204ENST00000481786 BTBD11A6QL63 1104 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 WASLO00401 505 aaPredicted RBP5.25□□□□□ -1.57
USH2A-204ENST00000481786 PPP2R2DQ66LE6 453 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 TAS1R3Q7RTX0 852 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 GOLGA6L1Q8N7Z2 621 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 NLRP3Q96P20 1036 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 RUBCNLQ9H714 662 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 ARHGEF10LQ9HCE6 1279 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
USH2A-204ENST00000481786 NEURL1BA8MQ27 555 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 EPXP11678 715 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 BMP4P12644 408 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 GATA4P43694 442 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 CLN3Q13286 438 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 NKAPLQ5M9Q1 402 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 ARTNQ5T4W7 220 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 SLCO4C1Q6ZQN7 724 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 ZFP64Q9NPA5 681 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 HCN2Q9UL51 889 aa5.24□□□□□ -1.57
USH2A-204ENST00000481786 BNIP3LO60238 219 aa5.23□□□□□ -1.57
USH2A-204ENST00000481786 ERVK-9P63128 1117 aa5.23□□□□□ -1.57
USH2A-204ENST00000481786 PROCA1Q8NCQ7 364 aaPredicted RBP5.23□□□□□ -1.57
USH2A-204ENST00000481786 TRIM11Q96F44 468 aa5.23□□□□□ -1.57
USH2A-204ENST00000481786 TPSG1Q9NRR2 321 aa5.23□□□□□ -1.57
USH2A-204ENST00000481786 PDE4DQ08499 809 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 WDR44Q5JSH3 913 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 RNF135Q8IUD6 432 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 NDFIP2Q9NV92 336 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 KLF15Q9UIH9 416 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 PHF24Q9UPV7 400 aa5.22□□□□□ -1.57
USH2A-204ENST00000481786 DYRK3O43781 588 aa5.21□□□□□ -1.58
USH2A-204ENST00000481786 FGFR3P22607 806 aa5.21□□□□□ -1.58
USH2A-204ENST00000481786 CHSY3Q70JA7 882 aa5.21□□□□□ -1.58
USH2A-204ENST00000481786 SEPT12Q8IYM1 358 aa5.21□□□□□ -1.58
USH2A-204ENST00000481786 OSBPL3Q9H4L5 887 aa5.21□□□□□ -1.58
USH2A-204ENST00000481786 AP1G2O75843 785 aa5.2□□□□□ -1.58
USH2A-204ENST00000481786 IL2RAP01589 272 aa5.2□□□□□ -1.58
USH2A-204ENST00000481786 CENPCQ03188 943 aa5.2□□□□□ -1.58
USH2A-204ENST00000481786 PLVAPQ9BX97 442 aa5.2□□□□□ -1.58
USH2A-204ENST00000481786 NOP53Q9NZM5 478 aaKnown RBP5.2□□□□□ -1.58
USH2A-204ENST00000481786 ATXN7L1Q9ULK2 861 aaPredicted RBP5.2□□□□□ -1.58
USH2A-204ENST00000481786 MSX1P28360 303 aa5.19□□□□□ -1.58
USH2A-204ENST00000481786 PRSS36Q5K4E3 855 aa5.19□□□□□ -1.58
USH2A-204ENST00000481786 FCHSD1Q86WN1 690 aa5.19□□□□□ -1.58
USH2A-204ENST00000481786 PCDHB9Q9Y5E1 797 aa5.19□□□□□ -1.58
USH2A-204ENST00000481786 A0A1B0GTH6 734 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 TRAK2O60296 914 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 C4orf17Q53FE4 359 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 CYP2U1Q7Z449 544 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 NBPF11Q86T75 865 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 CNKSR1Q969H4 720 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 GOLGA2P5Q9HBQ8 144 aa5.18□□□□□ -1.58
USH2A-204ENST00000481786 FAM229AH3BQW9 127 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 PIK3R2O00459 728 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 STAU1O95793 577 aaKnown RBP5.17□□□□□ -1.58
USH2A-204ENST00000481786 ARAFP10398 606 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 TPRNQ4KMQ1 711 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 ESYT1Q9BSJ8 1104 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 HRH3Q9Y5N1 445 aa5.17□□□□□ -1.58
USH2A-204ENST00000481786 USP17L8P0C7I0 530 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 CSB-PGBD3P0DP91 1061 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 PGBD3Q8N328 593 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 ZSCAN10Q96SZ4 725 aaPredicted RBP5.16□□□□□ -1.58
USH2A-204ENST00000481786 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.16□□□□□ -1.58
USH2A-204ENST00000481786 TRIM34Q9BYJ4 488 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 FHDC1Q9C0D6 1143 aaPredicted RBP5.16□□□□□ -1.58
USH2A-204ENST00000481786 RSPH6AQ9H0K4 717 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 DNAAF2Q9NVR5 837 aaKnown RBP5.16□□□□□ -1.58
USH2A-204ENST00000481786 PCDHB11Q9Y5F2 797 aa5.16□□□□□ -1.58
USH2A-204ENST00000481786 HYAL3O43820 417 aaPredicted RBP5.15□□□□□ -1.59
USH2A-204ENST00000481786 FBXO45P0C2W1 286 aa5.15□□□□□ -1.59
USH2A-204ENST00000481786 SPATA31C1P0DKV0 1188 aa5.15□□□□□ -1.59
USH2A-204ENST00000481786 CD33P20138 364 aa5.14□□□□□ -1.59
USH2A-204ENST00000481786 PCBP4P57723 403 aaKnown RBP5.14□□□□□ -1.59
USH2A-204ENST00000481786 LBRQ14739 615 aaKnown RBP5.14□□□□□ -1.59
USH2A-204ENST00000481786 EFHC2Q5JST6 749 aa5.14□□□□□ -1.59
USH2A-204ENST00000481786 CDCA7Q9BWT1 371 aaPredicted RBP5.14□□□□□ -1.59
USH2A-204ENST00000481786 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
USH2A-204ENST00000481786 ZCCHC2Q9C0B9 1178 aaKnown RBP5.14□□□□□ -1.59
USH2A-204ENST00000481786 KDM4CQ9H3R0 1056 aa5.14□□□□□ -1.59
USH2A-204ENST00000481786 GPBP1L1Q9HC44 474 aaPredicted RBP5.14□□□□□ -1.59
USH2A-204ENST00000481786 DCDC2BA2VCK2 349 aa5.13□□□□□ -1.59
USH2A-204ENST00000481786 ZBBXA8MT70 800 aa5.13□□□□□ -1.59
USH2A-204ENST00000481786 SKIV2LQ15477 1246 aaKnown RBP5.13□□□□□ -1.59
USH2A-204ENST00000481786 TMEM214Q6NUQ4 689 aaKnown RBP5.13□□□□□ -1.59
USH2A-204ENST00000481786 XAGE2Q96GT9 111 aa5.13□□□□□ -1.59
USH2A-204ENST00000481786 ATP1B4Q9UN42 357 aaPredicted RBP5.13□□□□□ -1.59
USH2A-204ENST00000481786 GRIK4Q16099 956 aa5.12□□□□□ -1.59
USH2A-204ENST00000481786 CRISPLD1Q9H336 500 aa5.12□□□□□ -1.59
USH2A-204ENST00000481786 PCDHGC4Q9Y5F7 938 aa5.12□□□□□ -1.59
USH2A-204ENST00000481786 GNRH1P01148 92 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 MAPTP10636 758 aaKnown RBP5.11□□□□□ -1.59
USH2A-204ENST00000481786 ADH6P28332 368 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 TNP2Q05952 138 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 COL9A3Q14050 684 aaPredicted RBP5.11□□□□□ -1.59
USH2A-204ENST00000481786 LRP8Q14114 963 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 GNASQ5JWF2 1037 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 C8orf86Q6ZUL3 223 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms