RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
LSM5-210ENST00000480956 DNAJC6O75061 913 aa10.84□□□□□ -0.67
LSM5-210ENST00000480956 DNAJB2P25686 324 aa10.84□□□□□ -0.67
LSM5-210ENST00000480956 FMR1Q06787 632 aaKnown RBP eCLIP10.84□□□□□ -0.67
LSM5-210ENST00000480956 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
LSM5-210ENST00000480956 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
LSM5-210ENST00000480956 RPUSD2Q8IZ73 545 aaKnown RBP10.84□□□□□ -0.67
LSM5-210ENST00000480956 SPC25Q9HBM1 224 aa10.84□□□□□ -0.67
LSM5-210ENST00000480956 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
LSM5-210ENST00000480956 SEPT3Q9UH03 358 aa10.84□□□□□ -0.67
LSM5-210ENST00000480956 TREHO43280 583 aa10.83□□□□□ -0.68
LSM5-210ENST00000480956 CLDN10P78369 228 aa10.83□□□□□ -0.68
LSM5-210ENST00000480956 KCNH2Q12809 1159 aa10.83□□□□□ -0.68
LSM5-210ENST00000480956 PSMD2Q13200 908 aa10.83□□□□□ -0.68
LSM5-210ENST00000480956 CCDC136Q96JN2 1154 aa10.83□□□□□ -0.68
LSM5-210ENST00000480956 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
LSM5-210ENST00000480956 C6orf229H3BNL8 230 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 ATP1A2P50993 1020 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 DAB2P98082 770 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 EML3Q32P44 896 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 VPS37DQ86XT2 251 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 PLPP7Q8NBV4 271 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 HLA-CQ95604 372 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 SGSM3Q96HU1 749 aa10.82□□□□□ -0.68
LSM5-210ENST00000480956 SMAPO00193 183 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 ENPP3O14638 875 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 EVI5LQ96CN4 794 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 RABGEF1Q9UJ41 708 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 PPFIA4O75335 1185 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
LSM5-210ENST00000480956 PTMSP20962 102 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 MAPK8P45983 427 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 GCGRP47871 477 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 TBX4P57082 545 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
LSM5-210ENST00000480956 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
LSM5-210ENST00000480956 MCF2L2Q86YR7 1114 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 MKNK1Q9BUB5 465 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 TMEM134Q9H6X4 195 aa10.8□□□□□ -0.68
LSM5-210ENST00000480956 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
LSM5-210ENST00000480956 SH3BP5O60239 455 aa10.79□□□□□ -0.68
LSM5-210ENST00000480956 RBM19Q9Y4C8 960 aaKnown RBP10.79□□□□□ -0.68
LSM5-210ENST00000480956 SEC13P55735 322 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 FMNL3Q8IVF7 1028 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
LSM5-210ENST00000480956 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 K7ELQ4 463 aaPredicted RBP10.78□□□□□ -0.68
LSM5-210ENST00000480956 PPP1R12AO14974 1030 aaPredicted RBP10.78□□□□□ -0.68
LSM5-210ENST00000480956 NDUFB5O43674 189 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 BIRC2Q13490 618 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 TSHZ1Q6ZSZ6 1077 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 NUDT18Q6ZVK8 323 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 TATDN2Q93075 761 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
LSM5-210ENST00000480956 ZNF654Q8IZM8 581 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 SIX5Q8N196 739 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 TMC1Q8TDI8 760 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 PRDM10Q9NQV6 1147 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 PRKAB1Q9Y478 270 aa10.77□□□□□ -0.69
LSM5-210ENST00000480956 FGRP09769 529 aa10.76□□□□□ -0.69
LSM5-210ENST00000480956 RHBDL3P58872 404 aa10.76□□□□□ -0.69
LSM5-210ENST00000480956 JDP2Q8WYK2 163 aa10.76□□□□□ -0.69
LSM5-210ENST00000480956 PAX3P23760 479 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.75□□□□□ -0.69
LSM5-210ENST00000480956 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
LSM5-210ENST00000480956 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 NISCHQ9Y2I1 1504 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 PRC1O43663 620 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 DKK1O94907 266 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 FAM13AO94988 1023 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 APLP1P51693 650 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 ATP2B2Q01814 1243 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 MAP7D1Q3KQU3 841 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
LSM5-210ENST00000480956 PTCD1O75127 700 aaKnown RBP10.74□□□□□ -0.69
LSM5-210ENST00000480956 ZNF394Q53GI3 561 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 ZFYVE27Q5T4F4 411 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 PACS2Q86VP3 889 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 CKAP2LQ8IYA6 745 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 NME8Q8N427 588 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 RPS6KC1Q96S38 1066 aa10.74□□□□□ -0.69
LSM5-210ENST00000480956 EHHADHQ08426 723 aa10.73□□□□□ -0.69
LSM5-210ENST00000480956 DSC3Q14574 896 aa10.73□□□□□ -0.69
LSM5-210ENST00000480956 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
LSM5-210ENST00000480956 PCDHGB7Q9Y5F8 929 aa10.73□□□□□ -0.69
LSM5-210ENST00000480956 PDGFRBP09619 1106 aa10.72□□□□□ -0.69
LSM5-210ENST00000480956 RACK1P63244 317 aaKnown RBP10.72□□□□□ -0.69
LSM5-210ENST00000480956 PHTF2Q8N3S3 785 aa10.72□□□□□ -0.69
LSM5-210ENST00000480956 HELQQ8TDG4 1101 aa10.72□□□□□ -0.69
LSM5-210ENST00000480956 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms