RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 NEDD1Q8NHV4 660 aa8.07□□□□□ -1.12
CLOCK-204ENST00000479384 XAGE2Q96GT9 111 aa8.07□□□□□ -1.12
CLOCK-204ENST00000479384 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
CLOCK-204ENST00000479384 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
CLOCK-204ENST00000479384 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
CLOCK-204ENST00000479384 A0A1B0GTH6 734 aa8.05□□□□□ -1.12
CLOCK-204ENST00000479384 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
CLOCK-204ENST00000479384 CFHR5Q9BXR6 569 aa8.05□□□□□ -1.12
CLOCK-204ENST00000479384 LRRC4BQ9NT99 713 aa8.05□□□□□ -1.12
CLOCK-204ENST00000479384 IRF5Q13568 498 aa8.04□□□□□ -1.12
CLOCK-204ENST00000479384 UBAP2LQ14157 1087 aaKnown RBP8.04□□□□□ -1.12
CLOCK-204ENST00000479384 C4orf17Q53FE4 359 aa8.04□□□□□ -1.12
CLOCK-204ENST00000479384 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
CLOCK-204ENST00000479384 DOLKQ9UPQ8 538 aa8.04□□□□□ -1.12
CLOCK-204ENST00000479384 OIP5O43482 229 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 STAU1O95793 577 aaKnown RBP8.03□□□□□ -1.12
CLOCK-204ENST00000479384 MAP2K3P46734 347 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLOCK-204ENST00000479384 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
CLOCK-204ENST00000479384 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
CLOCK-204ENST00000479384 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
CLOCK-204ENST00000479384 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
CLOCK-204ENST00000479384 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
CLOCK-204ENST00000479384 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
CLOCK-204ENST00000479384 ITGB2P05107 769 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 MSX1P28360 303 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 USP4Q13107 963 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 LBRQ14739 615 aaKnown RBP8.01□□□□□ -1.13
CLOCK-204ENST00000479384 SLFNL1Q499Z3 407 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 RNF135Q8IUD6 432 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 PRM3Q9NNZ6 103 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 CHIC2Q9UKJ5 165 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 PHF24Q9UPV7 400 aa8.01□□□□□ -1.13
CLOCK-204ENST00000479384 SHISA8B8ZZ34 492 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 CSB-PGBD3P0DP91 1061 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 TLR1Q15399 786 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 C1orf229Q6ZS94 237 aaPredicted RBP8□□□□□ -1.13
CLOCK-204ENST00000479384 PPARGC1BQ86YN6 1023 aaKnown RBP8□□□□□ -1.13
CLOCK-204ENST00000479384 PGBD3Q8N328 593 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 RHBDD1Q8TEB9 315 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 KLRG1Q96E93 195 aa8□□□□□ -1.13
CLOCK-204ENST00000479384 SNRPNP63162 240 aaKnown RBP7.99□□□□□ -1.13
CLOCK-204ENST00000479384 VAC14Q08AM6 782 aa7.99□□□□□ -1.13
CLOCK-204ENST00000479384 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
CLOCK-204ENST00000479384 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
CLOCK-204ENST00000479384 ABHD17AQ96GS6 310 aa7.98□□□□□ -1.13
CLOCK-204ENST00000479384 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
CLOCK-204ENST00000479384 MSTNO14793 375 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 SCNN1DP51172 638 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 SPOCK3Q9BQ16 436 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 CRISPLD1Q9H336 500 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
CLOCK-204ENST00000479384 GDF2Q9UK05 429 aaPredicted RBP7.97□□□□□ -1.13
CLOCK-204ENST00000479384 C2CD2LO14523 706 aa7.96□□□□□ -1.14
CLOCK-204ENST00000479384 PLA2G4AP47712 749 aa7.96□□□□□ -1.14
CLOCK-204ENST00000479384 GDF10P55107 478 aa7.96□□□□□ -1.14
CLOCK-204ENST00000479384 EDARADDQ8WWZ3 215 aa7.96□□□□□ -1.14
CLOCK-204ENST00000479384 BNIP3LO60238 219 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 PROCP04070 461 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 INHAP05111 366 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 BMP4P12644 408 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 FGFR3P22607 806 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 ABL2P42684 1182 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 GOLGA6L1Q8N7Z2 621 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 MKL2Q9ULH7 1088 aa7.95□□□□□ -1.14
CLOCK-204ENST00000479384 ATP4AP20648 1035 aa7.94□□□□□ -1.14
CLOCK-204ENST00000479384 CTBSQ01459 385 aa7.94□□□□□ -1.14
CLOCK-204ENST00000479384 TBC1D9Q6ZT07 1266 aa7.94□□□□□ -1.14
CLOCK-204ENST00000479384 PLPP7Q8NBV4 271 aa7.94□□□□□ -1.14
CLOCK-204ENST00000479384 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
CLOCK-204ENST00000479384 MAP7D1Q3KQU3 841 aa7.93□□□□□ -1.14
CLOCK-204ENST00000479384 SLCO4C1Q6ZQN7 724 aa7.93□□□□□ -1.14
CLOCK-204ENST00000479384 HOXB4P17483 251 aaPredicted RBP7.92□□□□□ -1.14
CLOCK-204ENST00000479384 COL8A1P27658 744 aa7.92□□□□□ -1.14
CLOCK-204ENST00000479384 SMTNP53814 917 aa7.92□□□□□ -1.14
CLOCK-204ENST00000479384 WASHC4Q2M389 1173 aa7.92□□□□□ -1.14
CLOCK-204ENST00000479384 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
CLOCK-204ENST00000479384 GGA1Q9UJY5 639 aa7.92□□□□□ -1.14
CLOCK-204ENST00000479384 KRBA1A5PL33 1030 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 TMEM229AB2RXF0 380 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 ADAM23O75077 832 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 FIGNL1Q6PIW4 674 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 ZNF295-AS1Q8N0V1 137 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 C1orf216Q8TAB5 229 aa7.91□□□□□ -1.14
CLOCK-204ENST00000479384 NIFKQ9BYG3 293 aaKnown RBP7.91□□□□□ -1.14
CLOCK-204ENST00000479384 ZCCHC2Q9C0B9 1178 aaKnown RBP7.91□□□□□ -1.14
CLOCK-204ENST00000479384 SEMA3FQ13275 785 aa7.9□□□□□ -1.14
CLOCK-204ENST00000479384 NLRP8Q86W28 1048 aa7.9□□□□□ -1.14
CLOCK-204ENST00000479384 AIDAQ96BJ3 306 aa7.9□□□□□ -1.14
CLOCK-204ENST00000479384 SERTAD1Q9UHV2 236 aa7.9□□□□□ -1.14
CLOCK-204ENST00000479384 PCDHGC4Q9Y5F7 938 aa7.9□□□□□ -1.14
CLOCK-204ENST00000479384 ARAFP10398 606 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms