RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
CLOCK-204ENST00000479384 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
CLOCK-204ENST00000479384 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
CLOCK-204ENST00000479384 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
CLOCK-204ENST00000479384 FOXD1Q16676 465 aa19.86■□□□□ 0.77
CLOCK-204ENST00000479384 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
CLOCK-204ENST00000479384 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
CLOCK-204ENST00000479384 ADRA2BP18089 450 aa18.56■□□□□ 0.56
CLOCK-204ENST00000479384 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
CLOCK-204ENST00000479384 MSH5O43196 834 aa18.54■□□□□ 0.56
CLOCK-204ENST00000479384 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
CLOCK-204ENST00000479384 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
CLOCK-204ENST00000479384 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
CLOCK-204ENST00000479384 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
CLOCK-204ENST00000479384 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
CLOCK-204ENST00000479384 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
CLOCK-204ENST00000479384 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
CLOCK-204ENST00000479384 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
CLOCK-204ENST00000479384 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
CLOCK-204ENST00000479384 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
CLOCK-204ENST00000479384 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
CLOCK-204ENST00000479384 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
CLOCK-204ENST00000479384 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
CLOCK-204ENST00000479384 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
CLOCK-204ENST00000479384 KCNA4P22459 653 aa15.61■□□□□ 0.09
CLOCK-204ENST00000479384 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
CLOCK-204ENST00000479384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.081e-6■■□□□ 12.2
CLOCK-204ENST00000479384 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
CLOCK-204ENST00000479384 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
CLOCK-204ENST00000479384 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
CLOCK-204ENST00000479384 CAPN15O75808 1086 aa14.94□□□□□ -0.02
CLOCK-204ENST00000479384 DSG3P32926 999 aa14.86□□□□□ -0.03
CLOCK-204ENST00000479384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
CLOCK-204ENST00000479384 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
CLOCK-204ENST00000479384 APLP2Q06481 763 aa14.77□□□□□ -0.05
CLOCK-204ENST00000479384 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
CLOCK-204ENST00000479384 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
CLOCK-204ENST00000479384 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
CLOCK-204ENST00000479384 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
CLOCK-204ENST00000479384 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
CLOCK-204ENST00000479384 ABCB7O75027 752 aa14.62□□□□□ -0.07
CLOCK-204ENST00000479384 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
CLOCK-204ENST00000479384 ZBTB22O15209 634 aa14.36□□□□□ -0.11
CLOCK-204ENST00000479384 POLA2Q14181 598 aa14.34□□□□□ -0.11
CLOCK-204ENST00000479384 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
CLOCK-204ENST00000479384 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
CLOCK-204ENST00000479384 POTEHQ6S545 545 aa14.12□□□□□ -0.15
CLOCK-204ENST00000479384 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
CLOCK-204ENST00000479384 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
CLOCK-204ENST00000479384 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
CLOCK-204ENST00000479384 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
CLOCK-204ENST00000479384 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
CLOCK-204ENST00000479384 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
CLOCK-204ENST00000479384 FBLN2P98095 1184 aa13.72□□□□□ -0.21
CLOCK-204ENST00000479384 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-204ENST00000479384 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
CLOCK-204ENST00000479384 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
CLOCK-204ENST00000479384 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
CLOCK-204ENST00000479384 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
CLOCK-204ENST00000479384 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
CLOCK-204ENST00000479384 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
CLOCK-204ENST00000479384 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
CLOCK-204ENST00000479384 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
CLOCK-204ENST00000479384 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLOCK-204ENST00000479384 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
CLOCK-204ENST00000479384 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
CLOCK-204ENST00000479384 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
CLOCK-204ENST00000479384 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLOCK-204ENST00000479384 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
CLOCK-204ENST00000479384 HAX1O00165 279 aa13.24□□□□□ -0.29
CLOCK-204ENST00000479384 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
CLOCK-204ENST00000479384 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
CLOCK-204ENST00000479384 EVX2Q03828 476 aa13.11□□□□□ -0.31
CLOCK-204ENST00000479384 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
CLOCK-204ENST00000479384 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
CLOCK-204ENST00000479384 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
CLOCK-204ENST00000479384 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
CLOCK-204ENST00000479384 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
CLOCK-204ENST00000479384 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
CLOCK-204ENST00000479384 GABBR2O75899 941 aa12.81□□□□□ -0.36
CLOCK-204ENST00000479384 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
CLOCK-204ENST00000479384 PROM2Q8N271 834 aa12.75□□□□□ -0.37
CLOCK-204ENST00000479384 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
CLOCK-204ENST00000479384 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
CLOCK-204ENST00000479384 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
CLOCK-204ENST00000479384 CLCN6P51797 869 aa12.6□□□□□ -0.39
CLOCK-204ENST00000479384 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLOCK-204ENST00000479384 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
CLOCK-204ENST00000479384 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
CLOCK-204ENST00000479384 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
CLOCK-204ENST00000479384 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
CLOCK-204ENST00000479384 FKBP8Q14318 412 aa12.46□□□□□ -0.41
CLOCK-204ENST00000479384 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
CLOCK-204ENST00000479384 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CLOCK-204ENST00000479384 MIER1Q8N108 512 aa12.4□□□□□ -0.42
CLOCK-204ENST00000479384 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
CLOCK-204ENST00000479384 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
CLOCK-204ENST00000479384 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
CLOCK-204ENST00000479384 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
CLOCK-204ENST00000479384 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms