RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 CDV3Q9UKY7 258 aaKnown RBP6.23□□□□□ -1.41
SUPT20H-215ENST00000478911 CNTNAP5Q8WYK1 1306 aa6.23□□□□□ -1.41
SUPT20H-215ENST00000478911 ESPNB1AK53 854 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 ATG7O95352 703 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 NBPF20Q3BBV1 942 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 MAP7D1Q3KQU3 841 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 DEPDC4Q8N2C3 294 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 GALNT6Q8NCL4 622 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 CCDC85AQ96PX6 553 aaPredicted RBP6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 TRAIPQ9BWF2 469 aa6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 ZNF395Q9H8N7 513 aaPredicted RBP6.22□□□□□ -1.41
SUPT20H-215ENST00000478911 ITGB2P05107 769 aa6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 NCOA4Q13772 614 aa6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 INTS6LQ5JSJ4 861 aaKnown RBP6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 PODNQ7Z5L7 613 aa6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 BEND7Q8N7W2 519 aaPredicted RBP6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 VRTNQ9H8Y1 702 aa6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 CUEDC1Q9NWM3 386 aaPredicted RBP6.21□□□□□ -1.42
SUPT20H-215ENST00000478911 LZTS3O60299 673 aaPredicted RBP6.2□□□□□ -1.42
SUPT20H-215ENST00000478911 PROCP04070 461 aa6.2□□□□□ -1.42
SUPT20H-215ENST00000478911 RNF20Q5VTR2 975 aa6.2□□□□□ -1.42
SUPT20H-215ENST00000478911 DOLKQ9UPQ8 538 aa6.2□□□□□ -1.42
SUPT20H-215ENST00000478911 USTQ9Y2C2 406 aa6.2□□□□□ -1.42
SUPT20H-215ENST00000478911 CSB-PGBD3P0DP91 1061 aa6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 EML3Q32P44 896 aa6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 SEPT12Q8IYM1 358 aa6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 NEDD1Q8NHV4 660 aa6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
SUPT20H-215ENST00000478911 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 K7ELQ4 463 aaPredicted RBP6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 ADH1AP07327 375 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 ELOAQ14241 798 aaKnown RBP6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 CRTC2Q53ET0 693 aaPredicted RBP6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 OXLD1Q5BKU9 147 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 LYSMD3Q7Z3D4 306 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 ZMIZ1Q9ULJ6 1067 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 PCDHB11Q9Y5F2 797 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 IGF1RP08069 1367 aa6.18□□□□□ -1.42
SUPT20H-215ENST00000478911 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L15C9J2P7 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L10C9JJH3 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L13C9JLJ4 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L11C9JVI0 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L21D6R901 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L18D6R9N7 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L22D6RA61 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L17D6RBQ6 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L19D6RCP7 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L20D6RJB6 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 BCRP11274 1271 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 PDE4CQ08493 712 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 USP17L24Q0WX57 530 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 CCDC125Q86Z20 511 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 CDCA7Q9BWT1 371 aaPredicted RBP6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 NOVA2Q9UNW9 492 aaKnown RBP6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 NOD1Q9Y239 953 aa6.17□□□□□ -1.42
SUPT20H-215ENST00000478911 TMEM88BA6NKF7 163 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 GPR25O00155 361 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 RASA1P20936 1047 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 RAB15P59190 212 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 TRIM26Q12899 539 aaPredicted RBP6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 PTK7Q13308 1070 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 FOXR1Q6PIV2 292 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 LARP1Q6PKG0 1096 aaKnown RBP6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 TRIM50Q86XT4 487 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 ZNF784Q8NCA9 323 aaPredicted RBP6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 STK32AQ8WU08 396 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 GMCL1Q96IK5 515 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 TMPRSS4Q9NRS4 437 aa6.16□□□□□ -1.42
SUPT20H-215ENST00000478911 CARNS1A5YM72 827 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 ERVH48-1M5A8F1 160 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 RHOQP17081 205 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 PTGIRP43119 386 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 CLDN10P78369 228 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 TMEM164Q5U3C3 297 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 TRIM22Q8IYM9 498 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
SUPT20H-215ENST00000478911 ATP1A2P50993 1020 aa6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 GTF2IP78347 998 aa6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 Q8N3U1 123 aa6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 ACDQ96AP0 544 aa6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 DNAAF2Q9NVR5 837 aaKnown RBP6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 KIAA1024Q9UPX6 916 aa6.14□□□□□ -1.43
SUPT20H-215ENST00000478911 LILRA1O75019 489 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 BAG6P46379 1132 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 SCTRP47872 440 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 USP4Q13107 963 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 RIPOR1Q6ZS17 1223 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 ANKMY2Q8IV38 441 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 LARGE2Q8N3Y3 721 aa6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 KDF1Q8NAX2 398 aaPredicted RBP6.13□□□□□ -1.43
SUPT20H-215ENST00000478911 SIRT1Q96EB6 747 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms