RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
CDK13-204ENST00000478563 CDC14CA4D256 554 aa10.4□□□□□ -0.74
CDK13-204ENST00000478563 ITGA6P23229 1130 aa10.4□□□□□ -0.74
CDK13-204ENST00000478563 ALG2Q9H553 416 aa10.4□□□□□ -0.74
CDK13-204ENST00000478563 MSTNO14793 375 aa10.39□□□□□ -0.75
CDK13-204ENST00000478563 PLA2G4EQ3MJ16 856 aa10.39□□□□□ -0.75
CDK13-204ENST00000478563 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
CDK13-204ENST00000478563 SV2AQ7L0J3 742 aa10.39□□□□□ -0.75
CDK13-204ENST00000478563 CCDC125Q86Z20 511 aa10.39□□□□□ -0.75
CDK13-204ENST00000478563 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
CDK13-204ENST00000478563 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
CDK13-204ENST00000478563 SCTRP47872 440 aa10.38□□□□□ -0.75
CDK13-204ENST00000478563 SPOCK3Q9BQ16 436 aa10.38□□□□□ -0.75
CDK13-204ENST00000478563 POLMQ9NP87 494 aaPredicted RBP10.38□□□□□ -0.75
CDK13-204ENST00000478563 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
CDK13-204ENST00000478563 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
CDK13-204ENST00000478563 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
CDK13-204ENST00000478563 IVNS1ABPQ9Y6Y0 642 aa10.36□□□□□ -0.75
CDK13-204ENST00000478563 ATP5J2-PTCD1G3V325 749 aa10.35□□□□□ -0.75
CDK13-204ENST00000478563 RNF144AP50876 292 aaPredicted RBP10.35□□□□□ -0.75
CDK13-204ENST00000478563 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
CDK13-204ENST00000478563 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
CDK13-204ENST00000478563 CELA2BP08218 269 aaPredicted RBP10.34□□□□□ -0.75
CDK13-204ENST00000478563 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
CDK13-204ENST00000478563 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
CDK13-204ENST00000478563 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
CDK13-204ENST00000478563 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
CDK13-204ENST00000478563 ATG7O95352 703 aa10.33□□□□□ -0.76
CDK13-204ENST00000478563 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
CDK13-204ENST00000478563 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
CDK13-204ENST00000478563 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
CDK13-204ENST00000478563 A0A1W2PRU2 124 aa10.32□□□□□ -0.76
CDK13-204ENST00000478563 PROCP04070 461 aa10.32□□□□□ -0.76
CDK13-204ENST00000478563 SOX11P35716 441 aa10.32□□□□□ -0.76
CDK13-204ENST00000478563 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
CDK13-204ENST00000478563 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
CDK13-204ENST00000478563 CNTNAP5Q8WYK1 1306 aa10.32□□□□□ -0.76
CDK13-204ENST00000478563 TMEM88BA6NKF7 163 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 MAP3K10Q02779 954 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 SRSF11Q05519 484 aaKnown RBP10.31□□□□□ -0.76
CDK13-204ENST00000478563 GAS6Q14393 721 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
CDK13-204ENST00000478563 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
CDK13-204ENST00000478563 GPC1P35052 558 aa10.3□□□□□ -0.76
CDK13-204ENST00000478563 KRTAP9-2Q9BYQ4 174 aa10.3□□□□□ -0.76
CDK13-204ENST00000478563 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
CDK13-204ENST00000478563 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
CDK13-204ENST00000478563 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDK13-204ENST00000478563 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
CDK13-204ENST00000478563 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
CDK13-204ENST00000478563 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
CDK13-204ENST00000478563 E9PSI1 815 aa10.28□□□□□ -0.76
CDK13-204ENST00000478563 CLN3Q13286 438 aa10.28□□□□□ -0.76
CDK13-204ENST00000478563 CYP2U1Q7Z449 544 aa10.28□□□□□ -0.76
CDK13-204ENST00000478563 GRIP2Q9C0E4 1043 aa10.28□□□□□ -0.76
CDK13-204ENST00000478563 MEN1O00255 615 aa10.27□□□□□ -0.77
CDK13-204ENST00000478563 RHOQP17081 205 aa10.27□□□□□ -0.77
CDK13-204ENST00000478563 PSMG3-AS1Q96PY0 264 aa10.27□□□□□ -0.77
CDK13-204ENST00000478563 KRTAP9-6A0A140TA67 174 aa10.26□□□□□ -0.77
CDK13-204ENST00000478563 ARHGEF10LQ9HCE6 1279 aa10.26□□□□□ -0.77
CDK13-204ENST00000478563 ATP9BO43861 1147 aa10.25□□□□□ -0.77
CDK13-204ENST00000478563 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDK13-204ENST00000478563 Q8N3U1 123 aa10.25□□□□□ -0.77
CDK13-204ENST00000478563 HRH3Q9Y5N1 445 aa10.25□□□□□ -0.77
CDK13-204ENST00000478563 PHF20L1A8MW92 1017 aa10.24□□□□□ -0.77
CDK13-204ENST00000478563 ENAMQ9NRM1 1142 aa10.24□□□□□ -0.77
CDK13-204ENST00000478563 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
CDK13-204ENST00000478563 K7ELQ4 463 aaPredicted RBP10.23□□□□□ -0.77
CDK13-204ENST00000478563 IL2RAP01589 272 aa10.23□□□□□ -0.77
CDK13-204ENST00000478563 GALNT6Q8NCL4 622 aa10.23□□□□□ -0.77
CDK13-204ENST00000478563 RAB6BQ9NRW1 208 aa10.23□□□□□ -0.77
CDK13-204ENST00000478563 GNRH1P01148 92 aa10.22□□□□□ -0.77
CDK13-204ENST00000478563 POU4F2Q12837 409 aa10.22□□□□□ -0.77
CDK13-204ENST00000478563 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
CDK13-204ENST00000478563 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
CDK13-204ENST00000478563 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
CDK13-204ENST00000478563 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
CDK13-204ENST00000478563 NLRP3Q96P20 1036 aa10.21□□□□□ -0.77
CDK13-204ENST00000478563 ESYT1Q9BSJ8 1104 aa10.21□□□□□ -0.77
CDK13-204ENST00000478563 AMOTL2Q9Y2J4 779 aa10.21□□□□□ -0.77
CDK13-204ENST00000478563 PIK3CDO00329 1044 aa10.2□□□□□ -0.78
CDK13-204ENST00000478563 B4GALNT3Q6L9W6 998 aa10.2□□□□□ -0.78
CDK13-204ENST00000478563 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
CDK13-204ENST00000478563 ZNF837Q96EG3 531 aaPredicted RBP10.2□□□□□ -0.78
CDK13-204ENST00000478563 XAGE2Q96GT9 111 aa10.2□□□□□ -0.78
CDK13-204ENST00000478563 FHDC1Q9C0D6 1143 aaPredicted RBP10.2□□□□□ -0.78
CDK13-204ENST00000478563 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
CDK13-204ENST00000478563 DYRK1BQ9Y463 629 aa10.2□□□□□ -0.78
CDK13-204ENST00000478563 WDR44Q5JSH3 913 aa10.19□□□□□ -0.78
CDK13-204ENST00000478563 SLC27A3Q5K4L6 730 aa10.19□□□□□ -0.78
CDK13-204ENST00000478563 STAU1O95793 577 aaKnown RBP10.18□□□□□ -0.78
CDK13-204ENST00000478563 CENPCQ03188 943 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 DBN1Q16643 649 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 TMEM164Q5U3C3 297 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
CDK13-204ENST00000478563 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms