RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 FOXJ1Q92949 421 aa6.88□□□□□ -1.31
SF3B6-202ENST00000478050 PREX1Q8TCU6 1659 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 ARHGEF5Q12774 1597 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 ARAP3Q8WWN8 1544 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 PZPP20742 1482 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 MOXD2PA6NHM9 499 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 ARID3CA6NKF2 412 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 SSTR3P32745 418 aaPredicted RBP6.87□□□□□ -1.31
SF3B6-202ENST00000478050 PREX2Q70Z35 1606 aa6.87□□□□□ -1.31
SF3B6-202ENST00000478050 WDR7Q9Y4E6 1490 aa6.86□□□□□ -1.31
SF3B6-202ENST00000478050 NCOA1Q15788 1441 aa6.86□□□□□ -1.31
SF3B6-202ENST00000478050 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
SF3B6-202ENST00000478050 NR3C2P08235 984 aa6.86□□□□□ -1.31
SF3B6-202ENST00000478050 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
SF3B6-202ENST00000478050 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.312e-6■■□□□ 14.4
SF3B6-202ENST00000478050 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
SF3B6-202ENST00000478050 CFDP1Q9UEE9 299 aaPredicted RBP6.86□□□□□ -1.31
SF3B6-202ENST00000478050 SUPT16HQ9Y5B9 1047 aaKnown RBP6.86□□□□□ -1.31
SF3B6-202ENST00000478050 KDM5DQ9BY66 1539 aa6.86□□□□□ -1.31
SF3B6-202ENST00000478050 ANKRD30AQ9BXX3 1397 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 CDC42BPBQ9Y5S2 1711 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 EIF4G2P78344 907 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 LYPD8Q6UX82 237 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 SVOPQ8N4V2 548 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 MEIOBQ8N635 442 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 GPR161Q8N6U8 529 aaKnown RBP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 ZC3H15Q8WU90 426 aaKnown RBP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 HIRIP3Q9BW71 556 aaPredicted RBP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
SF3B6-202ENST00000478050 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 FANCAO15360 1455 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 ATP10BO94823 1461 aa6.85□□□□□ -1.31
SF3B6-202ENST00000478050 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 KIAA1107Q9UPP5 1409 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 ZNF644Q9H582 1327 aaPredicted RBP6.84□□□□□ -1.31
SF3B6-202ENST00000478050 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.31
SF3B6-202ENST00000478050 IRS1P35568 1242 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 GRM5P41594 1212 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 KRT76Q01546 638 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 BPHLQ86WA6 291 aaPredicted RBP6.84□□□□□ -1.31
SF3B6-202ENST00000478050 L3MBTL2Q969R5 705 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 TSEN34Q9BSV6 310 aaKnown RBP6.84□□□□□ -1.31
SF3B6-202ENST00000478050 MBD5Q9P267 1494 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 MYO5CQ9NQX4 1742 aa6.84□□□□□ -1.31
SF3B6-202ENST00000478050 PLEKHD1A6NEE1 506 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 RAPGEF3O95398 923 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 IGHA1P01876 353 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
SF3B6-202ENST00000478050 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 SLC24A3Q9HC58 644 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 C9orf84Q5VXU9 1444 aa6.83□□□□□ -1.32
SF3B6-202ENST00000478050 MAST1Q9Y2H9 1570 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 ZNF335Q9H4Z2 1342 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-202ENST00000478050 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 PTSQ03393 145 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 MLECQ14165 292 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-202ENST00000478050 MAP10Q9P2G4 905 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 RGS17Q9UGC6 210 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-202ENST00000478050 DNMT3AQ9Y6K1 912 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-202ENST00000478050 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 TTC37Q6PGP7 1564 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 SAMD9LQ8IVG5 1584 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
SF3B6-202ENST00000478050 ARHGEF12Q9NZN5 1544 aa6.81□□□□□ -1.32
SF3B6-202ENST00000478050 SETD1BQ9UPS6 1966 aaKnown RBP6.81□□□□□ -1.32
SF3B6-202ENST00000478050 ZCCHC11Q5TAX3 1644 aaKnown RBP6.81□□□□□ -1.32
SF3B6-202ENST00000478050 ZNF385CQ66K41 422 aaPredicted RBP6.81□□□□□ -1.32
SF3B6-202ENST00000478050 EMILIN1Q9Y6C2 1016 aa6.81□□□□□ -1.32
SF3B6-202ENST00000478050 KDM5CP41229 1560 aa6.81□□□□□ -1.32
SF3B6-202ENST00000478050 CCDC141Q6ZP82 1450 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 UNC13BO14795 1591 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 NEFLP07196 543 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 FSHRP23945 695 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 KANK3Q6NY19 840 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 POTEAQ6S8J7 498 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 SPATA31E1Q6ZUB1 1445 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 VASH1Q7L8A9 365 aaPredicted RBP6.8□□□□□ -1.32
SF3B6-202ENST00000478050 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 ZNF777Q9ULD5 760 aaPredicted RBP6.8□□□□□ -1.32
SF3B6-202ENST00000478050 FER1L4A9Z1Z3 1794 aa6.8□□□□□ -1.32
SF3B6-202ENST00000478050 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 PLXNC1O60486 1568 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 FOXK2Q01167 660 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 NBPF8Q3BBV2 869 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 ARMC2Q8NEN0 867 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
SF3B6-202ENST00000478050 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
SF3B6-202ENST00000478050 ARXQ96QS3 562 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 ARHGEF40Q8TER5 1519 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
SF3B6-202ENST00000478050 CDC14CA4D256 554 aa6.78□□□□□ -1.32
SF3B6-202ENST00000478050 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms