RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 LRCH2Q5VUJ6 765 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 CXorf56Q9H5V9 222 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 ZKSCAN5Q9Y2L8 839 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 RPS6KL1Q9Y6S9 549 aa10.09□□□□□ -0.79
CNTNAP3B-205ENST00000476961 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 MYBBP1AQ9BQG0 1328 aaKnown RBP10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ANKRD36BQ8N2N9 1353 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NPC1L1Q9UHC9 1359 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 EXOC6Q8TAG9 804 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 FAM210AQ96ND0 272 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ADGRB2O60241 1585 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 HSPA2P54652 639 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NSD3Q9BZ95 1437 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CD163L1Q9NR16 1453 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 KDM4AO75164 1064 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 C1QTNF12Q5T7M4 302 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 TOMM22Q9NS69 142 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 A0A1W2PP64 1363 aa10.07□□□□□ -0.8
CNTNAP3B-205ENST00000476961 SENP3-EIF4A1A0A087X0R7 540 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CABP1Q9NZU7 370 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 KIF3CO14782 793 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CALRP27797 417 aaKnown RBP10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ANKRD7Q92527 254 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PRR36Q9H6K5 1346 aa10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CHD2O14647 1828 aaKnown RBP10.06□□□□□ -0.8
CNTNAP3B-205ENST00000476961 COQ9O75208 318 aa10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 FAM177A1Q8N128 213 aaPredicted RBP10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NUDT16Q96DE0 195 aaKnown RBP10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 FAM212AQ96EL1 285 aa10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ATP7BP35670 1465 aa10.05□□□□□ -0.8
CNTNAP3B-205ENST00000476961 POLD1P28340 1107 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CCT2P78371 535 aaKnown RBP10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NLRP13Q86W25 1043 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CASQ1P31415 396 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 HNRNPH2P55795 449 aaKnown RBP10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PIK3R5Q8WYR1 880 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
CNTNAP3B-205ENST00000476961 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PPP2R1AP30153 589 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 GYS2P54840 703 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 HDAC1Q13547 482 aaPredicted RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 MKL1Q969V6 931 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 PAIP2Q9BPZ3 127 aaKnown RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CTAGE5O15320 804 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 HSP90AB1P08238 724 aaKnown RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 JRKLQ9Y4A0 524 aa10.03□□□□□ -0.8
CNTNAP3B-205ENST00000476961 NWD1Q149M9 1564 aa10.02□□□□□ -0.8
CNTNAP3B-205ENST00000476961 CPSF1Q10570 1443 aaKnown RBP10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 INHBEP58166 350 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 CCDC91Q7Z6B0 441 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 USP19O94966 1318 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 NRDCO43847 1150 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 MAP9Q49MG5 647 aa10.02□□□□□ -0.81
CNTNAP3B-205ENST00000476961 IPO7O95373 1038 aaKnown RBP10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 LIG1P18858 919 aa10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 PPP2R5AQ15172 486 aa10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 CDC42BPGQ6DT37 1551 aa10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 TRDNQ13061 729 aa10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 DDX41Q9UJV9 622 aaKnown RBP10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 MORC2Q9Y6X9 1032 aaPredicted RBP10.01□□□□□ -0.81
CNTNAP3B-205ENST00000476961 TOPAZ1Q8N9V7 1692 aa10□□□□□ -0.81
CNTNAP3B-205ENST00000476961 SCP2P22307 547 aa10□□□□□ -0.81
CNTNAP3B-205ENST00000476961 DRC1Q96MC2 740 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms