RNA–Protein interactions for RNA: ENST00000476680.1

TNC-206, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-206ENST00000476680 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
TNC-206ENST00000476680 FAM208AQ9UK61 1670 aaKnown RBP10.75□□□□□ -0.69
TNC-206ENST00000476680 C4BP0C0L5 1744 aa10.75□□□□□ -0.69
TNC-206ENST00000476680 USP54Q70EL1 1684 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 TMF1P82094 1093 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 HSP90AB2PQ58FF8 381 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 YTHDC1Q96MU7 727 aaKnown RBP10.74□□□□□ -0.69
TNC-206ENST00000476680 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 RTL1A6NKG5 1358 aa10.74□□□□□ -0.69
TNC-206ENST00000476680 PPM1GO15355 546 aaPredicted RBP10.73□□□□□ -0.69
TNC-206ENST00000476680 HSPA1AP0DMV8 641 aaKnown RBP10.73□□□□□ -0.69
TNC-206ENST00000476680 HSPA1BP0DMV9 641 aaKnown RBP10.73□□□□□ -0.69
TNC-206ENST00000476680 ITPK1Q13572 414 aa10.73□□□□□ -0.69
TNC-206ENST00000476680 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
TNC-206ENST00000476680 RTCBQ9Y3I0 505 aaKnown RBP10.73□□□□□ -0.69
TNC-206ENST00000476680 NLGN1Q8N2Q7 840 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 SMC1BQ8NDV3 1235 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 RBM42Q9BTD8 480 aaKnown RBP10.72□□□□□ -0.69
TNC-206ENST00000476680 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 KCPQ6ZWJ8 1503 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 WDR90Q96KV7 1748 aa10.72□□□□□ -0.69
TNC-206ENST00000476680 RGPD2P0DJD1 1756 aa10.71□□□□□ -0.69
TNC-206ENST00000476680 RFC4P35249 363 aa10.71□□□□□ -0.69
TNC-206ENST00000476680 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
TNC-206ENST00000476680 DDX10Q13206 875 aaKnown RBP10.71□□□□□ -0.69
TNC-206ENST00000476680 DALRD3Q5D0E6 543 aaKnown RBP10.71□□□□□ -0.69
TNC-206ENST00000476680 CICQ96RK0 1608 aaPredicted RBP10.71□□□□□ -0.69
TNC-206ENST00000476680 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
TNC-206ENST00000476680 C10orf71Q711Q0 1435 aa10.69□□□□□ -0.7
TNC-206ENST00000476680 INSRP06213 1382 aa10.69□□□□□ -0.7
TNC-206ENST00000476680 FYB1O15117 783 aa10.69□□□□□ -0.7
TNC-206ENST00000476680 ANP32CO43423 234 aa10.69□□□□□ -0.7
TNC-206ENST00000476680 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
TNC-206ENST00000476680 TOGARAM1Q9Y4F4 1720 aa10.69□□□□□ -0.7
TNC-206ENST00000476680 FLT4P35916 1363 aa10.68□□□□□ -0.7
TNC-206ENST00000476680 TAF1LQ8IZX4 1826 aa10.68□□□□□ -0.7
TNC-206ENST00000476680 GYS1P13807 737 aa10.68□□□□□ -0.7
TNC-206ENST00000476680 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
TNC-206ENST00000476680 ATG3Q9NT62 314 aa10.68□□□□□ -0.7
TNC-206ENST00000476680 UBR3Q6ZT12 1888 aa10.68□□□□□ -0.7
TNC-206ENST00000476680 N4BP2Q86UW6 1770 aaPredicted RBP10.67□□□□□ -0.7
TNC-206ENST00000476680 CHRNA5P30532 468 aa10.67□□□□□ -0.7
TNC-206ENST00000476680 RASSF7Q02833 373 aa10.67□□□□□ -0.7
TNC-206ENST00000476680 DCAF5Q96JK2 942 aa10.67□□□□□ -0.7
TNC-206ENST00000476680 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
TNC-206ENST00000476680 ST20-MTHFSA0A0A6YYL1 179 aa10.66□□□□□ -0.7
TNC-206ENST00000476680 HSPA5P11021 654 aaKnown RBP10.66□□□□□ -0.7
TNC-206ENST00000476680 ADRA2BP18089 450 aa10.66□□□□□ -0.7
TNC-206ENST00000476680 KCNA3P22001 575 aa10.66□□□□□ -0.7
TNC-206ENST00000476680 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
TNC-206ENST00000476680 IFNL2Q8IZJ0 200 aa10.66□□□□□ -0.7
TNC-206ENST00000476680 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
TNC-206ENST00000476680 PHKG2P15735 406 aa10.65□□□□□ -0.7
TNC-206ENST00000476680 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.7
TNC-206ENST00000476680 RPS6KA4O75676 772 aa10.64□□□□□ -0.71
TNC-206ENST00000476680 MKRN1Q9UHC7 482 aaKnown RBP10.64□□□□□ -0.71
TNC-206ENST00000476680 PCNTO95613 3336 aa10.64□□□□□ -0.71
TNC-206ENST00000476680 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
TNC-206ENST00000476680 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
TNC-206ENST00000476680 FKBP8Q14318 412 aa10.63□□□□□ -0.71
TNC-206ENST00000476680 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
TNC-206ENST00000476680 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
TNC-206ENST00000476680 TESK2Q96S53 571 aa10.63□□□□□ -0.71
TNC-206ENST00000476680 EYA1Q99502 592 aa10.63□□□□□ -0.71
TNC-206ENST00000476680 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
TNC-206ENST00000476680 GLTPD2A6NH11 291 aa10.62□□□□□ -0.71
TNC-206ENST00000476680 CABP4P57796 275 aa10.62□□□□□ -0.71
TNC-206ENST00000476680 DDR1Q08345 913 aa10.62□□□□□ -0.71
TNC-206ENST00000476680 ITGB4P16144 1822 aa10.62□□□□□ -0.71
TNC-206ENST00000476680 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
TNC-206ENST00000476680 LMNB1P20700 586 aa10.61□□□□□ -0.71
TNC-206ENST00000476680 CRKLP46109 303 aaKnown RBP10.61□□□□□ -0.71
TNC-206ENST00000476680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
TNC-206ENST00000476680 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
TNC-206ENST00000476680 C4AP0C0L4 1744 aa10.61□□□□□ -0.71
TNC-206ENST00000476680 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
TNC-206ENST00000476680 ZPR1O75312 459 aa10.6□□□□□ -0.71
TNC-206ENST00000476680 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
TNC-206ENST00000476680 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
TNC-206ENST00000476680 KDRP35968 1356 aa10.6□□□□□ -0.71
TNC-206ENST00000476680 USP42Q9H9J4 1324 aaKnown RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
TNC-206ENST00000476680 ERVV-2B6SEH9 535 aa10.59□□□□□ -0.71
TNC-206ENST00000476680 FOXN1O15353 648 aa10.59□□□□□ -0.71
TNC-206ENST00000476680 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
TNC-206ENST00000476680 ZNF530Q6P9A1 599 aaPredicted RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 ZNF219Q9P2Y4 722 aaPredicted RBP10.59□□□□□ -0.71
TNC-206ENST00000476680 PKD1L3Q7Z443 1732 aa10.58□□□□□ -0.72
TNC-206ENST00000476680 POLRMTO00411 1230 aaKnown RBP10.58□□□□□ -0.72
TNC-206ENST00000476680 USPL1Q5W0Q7 1092 aa10.58□□□□□ -0.72
TNC-206ENST00000476680 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
TNC-206ENST00000476680 SLC34A2O95436 690 aa10.57□□□□□ -0.72
TNC-206ENST00000476680 MTHFSP49914 203 aa10.57□□□□□ -0.72
TNC-206ENST00000476680 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
TNC-206ENST00000476680 C1orf141Q5JVX7 400 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms