RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 ST20-MTHFSA0A0A6YYL1 179 aa28.44■■■□□ 2.14
HDAC11-217ENST00000475818 DPEP1P16444 411 aa28.44■■■□□ 2.14
HDAC11-217ENST00000475818 NKX1-1Q15270 411 aaPredicted RBP28.43■■■□□ 2.14
HDAC11-217ENST00000475818 C10orf71Q711Q0 1435 aa28.43■■■□□ 2.14
HDAC11-217ENST00000475818 C9orf131Q5VYM1 1079 aa28.42■■■□□ 2.14
HDAC11-217ENST00000475818 PKD1L3Q7Z443 1732 aa28.42■■■□□ 2.14
HDAC11-217ENST00000475818 JMYQ8N9B5 988 aa28.41■■■□□ 2.14
HDAC11-217ENST00000475818 SPG7Q9UQ90 795 aa28.41■■■□□ 2.14
HDAC11-217ENST00000475818 KIF13BQ9NQT8 1826 aa28.41■■■□□ 2.14
HDAC11-217ENST00000475818 TMF1P82094 1093 aa28.4■■■□□ 2.14
HDAC11-217ENST00000475818 TRAPPC3LQ5T215 181 aa28.39■■■□□ 2.14
HDAC11-217ENST00000475818 TNS4Q8IZW8 715 aa28.39■■■□□ 2.14
HDAC11-217ENST00000475818 CCDC87Q9NVE4 849 aa28.39■■■□□ 2.14
HDAC11-217ENST00000475818 EMILIN1Q9Y6C2 1016 aa28.39■■■□□ 2.14
HDAC11-217ENST00000475818 NLGN1Q8N2Q7 840 aa28.38■■■□□ 2.13
HDAC11-217ENST00000475818 RTCBQ9Y3I0 505 aaKnown RBP28.38■■■□□ 2.13
HDAC11-217ENST00000475818 FSTL1Q12841 308 aa28.37■■■□□ 2.13
HDAC11-217ENST00000475818 ATG3Q9NT62 314 aa28.37■■■□□ 2.13
HDAC11-217ENST00000475818 KIF24Q5T7B8 1368 aa28.37■■■□□ 2.13
HDAC11-217ENST00000475818 KCPQ6ZWJ8 1503 aa28.36■■■□□ 2.13
HDAC11-217ENST00000475818 PLEKHG2Q9H7P9 1386 aa28.36■■■□□ 2.13
HDAC11-217ENST00000475818 PPM1GO15355 546 aaPredicted RBP28.34■■■□□ 2.13
HDAC11-217ENST00000475818 ARHGEF1Q92888 912 aaKnown RBP28.34■■■□□ 2.13
HDAC11-217ENST00000475818 PARP3Q9Y6F1 533 aa28.34■■■□□ 2.13
HDAC11-217ENST00000475818 RRAGCQ9HB90 399 aa28.33■■■□□ 2.13
HDAC11-217ENST00000475818 TONSLQ96HA7 1378 aa28.33■■■□□ 2.13
HDAC11-217ENST00000475818 NCAPD2Q15021 1401 aa28.33■■■□□ 2.13
HDAC11-217ENST00000475818 GYS1P13807 737 aa28.32■■■□□ 2.12
HDAC11-217ENST00000475818 PHKG2P15735 406 aa28.32■■■□□ 2.12
HDAC11-217ENST00000475818 RNF181Q9P0P0 153 aa28.32■■■□□ 2.12
HDAC11-217ENST00000475818 KDM2BQ8NHM5 1336 aa28.32■■■□□ 2.12
HDAC11-217ENST00000475818 C4AP0C0L4 1744 aa28.32■■■□□ 2.12
HDAC11-217ENST00000475818 KCNA3P22001 575 aa28.31■■■□□ 2.12
HDAC11-217ENST00000475818 RBM42Q9BTD8 480 aaKnown RBP28.31■■■□□ 2.12
HDAC11-217ENST00000475818 KDRP35968 1356 aa28.31■■■□□ 2.12
HDAC11-217ENST00000475818 PRELPP51888 382 aa28.3■■■□□ 2.12
HDAC11-217ENST00000475818 IFNL2Q8IZJ0 200 aa28.3■■■□□ 2.12
HDAC11-217ENST00000475818 SLC4A9Q96Q91 983 aa28.3■■■□□ 2.12
HDAC11-217ENST00000475818 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
HDAC11-217ENST00000475818 SLC24A1O60721 1099 aa28.29■■■□□ 2.12
HDAC11-217ENST00000475818 RFC4P35249 363 aa28.29■■■□□ 2.12
HDAC11-217ENST00000475818 EYA1Q99502 592 aa28.29■■■□□ 2.12
HDAC11-217ENST00000475818 PIM2Q9P1W9 311 aa28.29■■■□□ 2.12
HDAC11-217ENST00000475818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.28■■■□□ 2.12
HDAC11-217ENST00000475818 ADRA2BP18089 450 aa28.27■■■□□ 2.12
HDAC11-217ENST00000475818 DCAF5Q96JK2 942 aa28.27■■■□□ 2.12
HDAC11-217ENST00000475818 BRCA1P38398 1863 aaKnown RBP28.27■■■□□ 2.12
HDAC11-217ENST00000475818 DALRD3Q5D0E6 543 aaKnown RBP28.26■■■□□ 2.11
HDAC11-217ENST00000475818 RPS6KA4O75676 772 aa28.24■■■□□ 2.11
HDAC11-217ENST00000475818 RC3H1Q5TC82 1133 aaKnown RBP28.24■■■□□ 2.11
HDAC11-217ENST00000475818 SMC1BQ8NDV3 1235 aa28.24■■■□□ 2.11
HDAC11-217ENST00000475818 CNTNAP4Q9C0A0 1308 aa28.23■■■□□ 2.11
HDAC11-217ENST00000475818 CHRNA5P30532 468 aa28.22■■■□□ 2.11
HDAC11-217ENST00000475818 ARFGEF1Q9Y6D6 1849 aa28.22■■■□□ 2.11
HDAC11-217ENST00000475818 CARD14Q9BXL6 1004 aa28.21■■■□□ 2.11
HDAC11-217ENST00000475818 SRP68Q9UHB9 627 aaKnown RBP28.21■■■□□ 2.11
HDAC11-217ENST00000475818 WASHC2AQ641Q2 1341 aa28.2■■■□□ 2.11
HDAC11-217ENST00000475818 HSPA1AP0DMV8 641 aaKnown RBP28.2■■■□□ 2.1
HDAC11-217ENST00000475818 HSPA1BP0DMV9 641 aaKnown RBP28.2■■■□□ 2.1
HDAC11-217ENST00000475818 DDR1Q08345 913 aa28.18■■■□□ 2.1
HDAC11-217ENST00000475818 FKBP8Q14318 412 aa28.18■■■□□ 2.1
HDAC11-217ENST00000475818 TNRC6CQ9HCJ0 1690 aaKnown RBP28.18■■■□□ 2.1
HDAC11-217ENST00000475818 COL5A3P25940 1745 aaPredicted RBP28.17■■■□□ 2.1
HDAC11-217ENST00000475818 ERVV-2B6SEH9 535 aa28.16■■■□□ 2.1
HDAC11-217ENST00000475818 RASSF7Q02833 373 aa28.16■■■□□ 2.1
HDAC11-217ENST00000475818 ANKRD26Q9UPS8 1709 aa28.14■■■□□ 2.1
HDAC11-217ENST00000475818 ZNF831Q5JPB2 1677 aa28.13■■■□□ 2.09
HDAC11-217ENST00000475818 PTCD1O75127 700 aaKnown RBP28.13■■■□□ 2.09
HDAC11-217ENST00000475818 USP42Q9H9J4 1324 aaKnown RBP28.13■■■□□ 2.09
HDAC11-217ENST00000475818 CRKLP46109 303 aaKnown RBP28.12■■■□□ 2.09
HDAC11-217ENST00000475818 CABP4P57796 275 aa28.12■■■□□ 2.09
HDAC11-217ENST00000475818 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
HDAC11-217ENST00000475818 PCNTO95613 3336 aa28.11■■■□□ 2.09
HDAC11-217ENST00000475818 POLKQ9UBT6 870 aa28.11■■■□□ 2.09
HDAC11-217ENST00000475818 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
HDAC11-217ENST00000475818 HSP90AB1P08238 724 aaKnown RBP28.09■■■□□ 2.09
HDAC11-217ENST00000475818 CDCA8Q53HL2 280 aa28.09■■■□□ 2.09
HDAC11-217ENST00000475818 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
HDAC11-217ENST00000475818 POLRMTO00411 1230 aaKnown RBP28.08■■■□□ 2.09
HDAC11-217ENST00000475818 VEGFAP15692 232 aaPredicted RBP28.08■■■□□ 2.09
HDAC11-217ENST00000475818 SBF1O95248 1867 aa28.08■■■□□ 2.09
HDAC11-217ENST00000475818 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
HDAC11-217ENST00000475818 ZNF530Q6P9A1 599 aaPredicted RBP28.07■■■□□ 2.08
HDAC11-217ENST00000475818 GLTPD2A6NH11 291 aa28.06■■■□□ 2.08
HDAC11-217ENST00000475818 ZC3H4Q9UPT8 1303 aaKnown RBP28.06■■■□□ 2.08
HDAC11-217ENST00000475818 LMNB1P20700 586 aa28.05■■■□□ 2.08
HDAC11-217ENST00000475818 TM4SF1P30408 202 aa28.04■■■□□ 2.08
HDAC11-217ENST00000475818 PLEKHO1Q53GL0 409 aaPredicted RBP28.04■■■□□ 2.08
HDAC11-217ENST00000475818 MTHFSP49914 203 aa28.01■■■□□ 2.07
HDAC11-217ENST00000475818 USPL1Q5W0Q7 1092 aa28.01■■■□□ 2.07
HDAC11-217ENST00000475818 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.07
HDAC11-217ENST00000475818 ZPR1O75312 459 aa28■■■□□ 2.07
HDAC11-217ENST00000475818 NFATC2IPQ8NCF5 419 aa28■■■□□ 2.07
HDAC11-217ENST00000475818 TJP1Q07157 1748 aa27.98■■■□□ 2.07
HDAC11-217ENST00000475818 C1orf141Q5JVX7 400 aa27.97■■■□□ 2.07
HDAC11-217ENST00000475818 NFIXQ14938 502 aa27.96■■■□□ 2.07
HDAC11-217ENST00000475818 AMOTQ4VCS5 1084 aa27.96■■■□□ 2.07
HDAC11-217ENST00000475818 MKRN1Q9UHC7 482 aaKnown RBP27.96■■■□□ 2.07
HDAC11-217ENST00000475818 POTECB2RU33 542 aa27.95■■■□□ 2.06
HDAC11-217ENST00000475818 NFKBIEO00221 500 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms