RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 BAG6P46379 1132 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
PCCB-213ENST00000475214 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
PCCB-213ENST00000475214 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
PCCB-213ENST00000475214 TSPYL6Q8N831 410 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 IL17REQ8NFR9 667 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 STRN4Q9NRL3 753 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
PCCB-213ENST00000475214 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
PCCB-213ENST00000475214 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
PCCB-213ENST00000475214 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
PCCB-213ENST00000475214 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
PCCB-213ENST00000475214 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
PCCB-213ENST00000475214 PLEKHG2Q9H7P9 1386 aa13.05□□□□□ -0.32
PCCB-213ENST00000475214 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
PCCB-213ENST00000475214 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
PCCB-213ENST00000475214 SPG7Q9UQ90 795 aa13.04□□□□□ -0.32
PCCB-213ENST00000475214 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
PCCB-213ENST00000475214 SRCAPQ6ZRS2 3230 aa13.04□□□□□ -0.32
PCCB-213ENST00000475214 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
PCCB-213ENST00000475214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCCB-213ENST00000475214 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
PCCB-213ENST00000475214 TRIM27P14373 513 aa13.02□□□□□ -0.33
PCCB-213ENST00000475214 TEFQ10587 303 aa13.02□□□□□ -0.33
PCCB-213ENST00000475214 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
PCCB-213ENST00000475214 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
PCCB-213ENST00000475214 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
PCCB-213ENST00000475214 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
PCCB-213ENST00000475214 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
PCCB-213ENST00000475214 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
PCCB-213ENST00000475214 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
PCCB-213ENST00000475214 RLBP1P12271 317 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
PCCB-213ENST00000475214 DISP2A7MBM2 1401 aa13□□□□□ -0.33
PCCB-213ENST00000475214 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
PCCB-213ENST00000475214 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
PCCB-213ENST00000475214 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
PCCB-213ENST00000475214 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
PCCB-213ENST00000475214 CHMP4BQ9H444 224 aaKnown RBP13□□□□□ -0.33
PCCB-213ENST00000475214 USP35Q9P2H5 1018 aa13□□□□□ -0.33
PCCB-213ENST00000475214 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
PCCB-213ENST00000475214 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
PCCB-213ENST00000475214 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
PCCB-213ENST00000475214 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
PCCB-213ENST00000475214 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
PCCB-213ENST00000475214 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
PCCB-213ENST00000475214 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
PCCB-213ENST00000475214 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
PCCB-213ENST00000475214 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
PCCB-213ENST00000475214 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
PCCB-213ENST00000475214 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
PCCB-213ENST00000475214 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
PCCB-213ENST00000475214 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
PCCB-213ENST00000475214 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
PCCB-213ENST00000475214 PHKG2P15735 406 aa12.97□□□□□ -0.33
PCCB-213ENST00000475214 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
PCCB-213ENST00000475214 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
PCCB-213ENST00000475214 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
PCCB-213ENST00000475214 MEGF6O75095 1541 aa12.97□□□□□ -0.33
PCCB-213ENST00000475214 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
PCCB-213ENST00000475214 PTPRCP08575 1304 aa12.96□□□□□ -0.33
PCCB-213ENST00000475214 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
PCCB-213ENST00000475214 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.34
PCCB-213ENST00000475214 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
PCCB-213ENST00000475214 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
PCCB-213ENST00000475214 HOXB7P09629 217 aa12.95□□□□□ -0.34
PCCB-213ENST00000475214 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
PCCB-213ENST00000475214 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
PCCB-213ENST00000475214 ABCC4O15439 1325 aa12.94□□□□□ -0.34
PCCB-213ENST00000475214 IL2RBP14784 551 aa12.94□□□□□ -0.34
PCCB-213ENST00000475214 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
PCCB-213ENST00000475214 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
PCCB-213ENST00000475214 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
PCCB-213ENST00000475214 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
PCCB-213ENST00000475214 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
PCCB-213ENST00000475214 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
PCCB-213ENST00000475214 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
PCCB-213ENST00000475214 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
PCCB-213ENST00000475214 TRIM37O94972 964 aa12.93□□□□□ -0.34
PCCB-213ENST00000475214 APBA3O96018 575 aa12.93□□□□□ -0.34
PCCB-213ENST00000475214 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
PCCB-213ENST00000475214 CAMKK2Q96RR4 588 aa12.93□□□□□ -0.34
PCCB-213ENST00000475214 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
PCCB-213ENST00000475214 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
PCCB-213ENST00000475214 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
PCCB-213ENST00000475214 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
PCCB-213ENST00000475214 DDB1Q16531 1140 aa12.92□□□□□ -0.34
PCCB-213ENST00000475214 HDGFL1Q5TGJ6 251 aa12.92□□□□□ -0.34
PCCB-213ENST00000475214 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
PCCB-213ENST00000475214 CYP27B1O15528 508 aa12.91□□□□□ -0.34
PCCB-213ENST00000475214 IGHDP01880 384 aa12.91□□□□□ -0.34
PCCB-213ENST00000475214 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms