RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	KDM6A	O15550	1401 aa	Predicted RBP	13.74	□□□□□ -0.21
MRPS18B-208	ENST00000472267	KCNQ3	O43525	872 aa		13.74	□□□□□ -0.21
MRPS18B-208	ENST00000472267	NECTIN2	Q92692	538 aa		13.74	□□□□□ -0.21
MRPS18B-208	ENST00000472267	HSP90AB1	P08238	724 aa	Known RBP	13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	DDX54	Q8TDD1	881 aa	Known RBP	13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	ADAMTS7	Q9UKP4	1686 aa		13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	SIPA1L3	O60292	1781 aa	Predicted RBP	13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	PCDH11X	Q9BZA7	1347 aa		13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	PCDH11Y	Q9BZA8	1340 aa		13.73	□□□□□ -0.21
MRPS18B-208	ENST00000472267	EIF4A1	P60842	406 aa	Known RBP	13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	MVP	Q14764	893 aa	Known RBP	13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	ITPRIP	Q8IWB1	547 aa		13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	DCAF5	Q96JK2	942 aa		13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	SLC52A2	Q9HAB3	445 aa		13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	SLC4A2	P04920	1241 aa		13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	TMEM57	Q8N5G2	664 aa		13.72	□□□□□ -0.21
MRPS18B-208	ENST00000472267	JCAD	Q9P266	1359 aa		13.71	□□□□□ -0.21
MRPS18B-208	ENST00000472267	CCDC30	Q5VVM6	783 aa		13.71	□□□□□ -0.22
MRPS18B-208	ENST00000472267	NFATC2IP	Q8NCF5	419 aa		13.71	□□□□□ -0.22
MRPS18B-208	ENST00000472267	ARHGAP45	Q92619	1136 aa		13.71	□□□□□ -0.22
MRPS18B-208	ENST00000472267	STK31	Q9BXU1	1019 aa		13.71	□□□□□ -0.22
MRPS18B-208	ENST00000472267	API5	Q9BZZ5	524 aa	Known RBP	13.71	□□□□□ -0.22
MRPS18B-208	ENST00000472267	EIF2S2	P20042	333 aa	Known RBP	13.7	□□□□□ -0.22
MRPS18B-208	ENST00000472267	CABP4	P57796	275 aa		13.7	□□□□□ -0.22
MRPS18B-208	ENST00000472267	SHANK3	Q9BYB0	1731 aa		13.7	□□□□□ -0.22
MRPS18B-208	ENST00000472267	SOS1	Q07889	1333 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPS18B-208	ENST00000472267	NRAP	Q86VF7	1730 aa		13.69	□□□□□ -0.22
MRPS18B-208	ENST00000472267	SLC39A6	Q13433	755 aa		13.69	□□□□□ -0.22
MRPS18B-208	ENST00000472267	HDGFL1	Q5TGJ6	251 aa		13.69	□□□□□ -0.22
MRPS18B-208	ENST00000472267	C8orf37	Q96NL8	207 aa		13.68	□□□□□ -0.22
MRPS18B-208	ENST00000472267	DDX19B	Q9UMR2	479 aa		13.68	□□□□□ -0.22
MRPS18B-208	ENST00000472267	CCDC9	Q9Y3X0	531 aa	Known RBP	13.68	□□□□□ -0.22
MRPS18B-208	ENST00000472267	ADRA2B	P18089	450 aa		13.68	□□□□□ -0.22
MRPS18B-208	ENST00000472267	G2E3	Q7L622	706 aa		13.68	□□□□□ -0.22
MRPS18B-208	ENST00000472267	NWD2	Q9ULI1	1742 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	HSPA1L	P34931	641 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	ZNF790	Q6PG37	636 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	NGLY1	Q96IV0	654 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	MRC1	P22897	1456 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	ABCC4	O15439	1325 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	PTPRC	P08575	1304 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	WNK3	Q9BYP7	1800 aa		13.67	□□□□□ -0.22
MRPS18B-208	ENST00000472267	DISP2	A7MBM2	1401 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	CACNA1F	O60840	1977 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	HOXB7	P09629	217 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	AAMP	Q13685	434 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	TTC5	Q8N0Z6	440 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	SPATA31A1	Q5TZJ5	1347 aa		13.66	□□□□□ -0.22
MRPS18B-208	ENST00000472267	EXOC5	O00471	708 aa		13.65	□□□□□ -0.22
MRPS18B-208	ENST00000472267	NKX1-1	Q15270	411 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPS18B-208	ENST00000472267	SLIT2	O94813	1529 aa		13.65	□□□□□ -0.22
MRPS18B-208	ENST00000472267	PRAMEF22	A3QJZ6	481 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ERVV-2	B6SEH9	535 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	GIGYF1	O75420	1035 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	CHMP4A	Q9BY43	222 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	PCDHB15	Q9Y5E8	787 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SPATA31A6	Q5VVP1	1343 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	FLII	Q13045	1269 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	FKBP5	Q13451	457 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	UNC5CL	Q8IV45	518 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	CHPF2	Q9P2E5	772 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SPATA31A5	Q5VU36	1347 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SPATA31A7	Q8IWB4	1347 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	KDM2B	Q8NHM5	1336 aa		13.64	□□□□□ -0.23
MRPS18B-208	ENST00000472267	RGS12	O14924	1447 aa		13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267		F6X3S4	739 aa		13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	IGHD	P01880	384 aa		13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	MEX3C	Q5U5Q3	659 aa	Known RBP	13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SLC4A10	Q6U841	1118 aa		13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ZNF496	Q96IT1	587 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	THRAP3	Q9Y2W1	955 aa	Known RBP	13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	HEG1	Q9ULI3	1381 aa		13.63	□□□□□ -0.23
MRPS18B-208	ENST00000472267	KAT6B	Q8WYB5	2073 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	LRP6	O75581	1613 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	TOGARAM1	Q9Y4F4	1720 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ANXA1	P04083	346 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	PHAX	Q9H814	394 aa	Known RBP	13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ZBTB40	Q9NUA8	1239 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	C5	P01031	1676 aa		13.62	□□□□□ -0.23
MRPS18B-208	ENST00000472267	FMNL2	Q96PY5	1086 aa		13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	CHMP4B	Q9H444	224 aa	Known RBP	13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	TMOD3	Q9NYL9	352 aa		13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ZBTB7B	O15156	539 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	DDB1	Q16531	1140 aa		13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	TNS2	Q63HR2	1409 aa		13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	INTS3	Q68E01	1043 aa	Known RBP	13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	RWDD1	Q9H446	243 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	DBF4	Q9UBU7	674 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SNRPA1	P09661	255 aa	Known RBP	13.6	□□□□□ -0.23
MRPS18B-208	ENST00000472267	C1orf115	Q9H7X2	142 aa		13.6	□□□□□ -0.23
MRPS18B-208	ENST00000472267	BCL9L	Q86UU0	1499 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	VPS72	Q15906	364 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	PROSER3	Q2NL68	480 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	SKAP1	Q86WV1	359 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	USP21	Q9UK80	565 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	ITGB4	P16144	1822 aa		13.59	□□□□□ -0.23
MRPS18B-208	ENST00000472267	PTCD1	O75127	700 aa	Known RBP	13.58	□□□□□ -0.24
MRPS18B-208	ENST00000472267	CCT4	P50991	539 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms